Addgene (tool)

RRID:SCR_002037

Non-profit plasmid repository dedicated to helping scientists around the world share high-quality plasmids. Facilitates archiving and distributing DNA-based research reagents and associated data to scientists worldwide. Repository contains over 65,000 plasmids, including special collections on CRISPR, fluorescent proteins, and ready-to-use viral preparations. There is no cost for scientists to deposit plasmids, which saves time and money associated with shipping plasmids themselves. All plasmids are fully sequenced for validation and sequencing data is openly available. We handle the appropriate Material Transfer Agreements (MTA) with institutions, facilitating open exchange and offering intellectual property and liability protection for depositing scientists. Furthermore, we curate free educational resources for the scientific community including a blog, eBooks, video protocols, and detailed molecular biology resources.

JASPAR (tool)

RRID:SCR_003030

Open source database of curated, non-redundant set of profiles derived from published collections of experimentally defined transcription factor binding sites for multicellular eukaryotes. Consists of open data access, non-redundancy and quality. JASPAR CORE is smaller set that is non-redundant and curated. Collection of transcription factor DNA-binding preferences, modeled as matrices. These can be converted into Position Weight Matrices (PWMs or PSSMs), used for scanning genomic sequences. Web interface for browsing, searching and subset selection, online sequence analysis utility and suite of programming tools for genome-wide and comparative genomic analysis of regulatory regions. New functions include clustering of matrix models by similarity, generation of random matrices by sampling from selected sets of existing models and a language-independent Web Service applications programming interface for matrix retrieval.

NCBI (tool)

RRID:SCR_006472

A portal to biomedical and genomic information. NCBI creates public databases, conducts research in computational biology, develops software tools for analyzing genome data, and disseminates biomedical information for the better understanding of molecular processes affecting human health and disease.

Thermo Fisher Scientific (tool)

RRID:SCR_008452

Commercial vendor and service provider of laboratory reagents and antibodies. Supplier of scientific instrumentation, reagents and consumables, and software services.

Scion Image (tool)

RRID:SCR_008673

THIS RESOURCE IS NO LONGER IN SERVICE, documented on July 17, 2013. Commercial software vendor.

Abcam (tool)

RRID:SCR_012931

A commercial antibody supplier which supplies primary and secondary antibodies, biochemicals, proteins, peptides, lysates, immunoassays and other kits.

C57BL/6J (tool)

RRID:IMSR_JAX:000664

Mus musculus with name C57BL/6J from IMSR.

Mouse Anti-P19 Monoclonal antibody, Unconjugated, Clone e-11 (antibody)

RRID:AB_628069

This monoclonal targets p19

Ki67 antibody - Proliferation Marker (antibody)

RRID:AB_443209

This polyclonal targets Ki67 antibody - Proliferation Marker

Mouse Anti-8-Hydroxy-2'-deoxyguanosine Monoclonal Antibody, Unconjugated, Clone N45.1 (antibody)

RRID:AB_867461

This monoclonal targets 8-Hydroxy-2'-deoxyguanosine

TP53-human (antibody)

RRID:AB_628082

This monoclonal targets TP53

p16 ARC antibody [EP1551Y] (antibody)

RRID:AB_2059963

This monoclonal targets p16 ARC

Cdk6 (phospho Y24) antibody (antibody)

RRID:AB_11156738

This polyclonal targets Cdk6 (phospho Y24) antibody

VEGF 165A antibody [6B7] (antibody)

RRID:AB_1271452

This monoclonal targets VEGF 165A antibody [6B7]

NFkappaB p65 (4H211) (antibody)

RRID:AB_1126640

This monoclonal targets NFkappaB p65 (4H211)

IGF1 antibody (antibody)

RRID:AB_308724

This polyclonal targets IGF1

Mouse Anti-Actin, beta Monoclonal Antibody, Unconjugated, Clone mAbcam 8226 (antibody)

RRID:AB_306371

This monoclonal targets beta Actin

E2F2-human (antibody)

RRID:AB_2096793

This polyclonal targets E2F2

Mouse Anti-E2F-1 Monoclonal Antibody, Unconjugated, Clone C-7 (antibody)

RRID:AB_2096771

This monoclonal targets E2F1

Rabbit Anti-Human MMP13 Polyclonal Antibody, Unconjugated (antibody)

RRID:AB_776416

This polyclonal targets Human MMP13 - Hinge region

p-Rb (Tyr356) (7F10) (antibody)

RRID:AB_785453

This monoclonal targets p-Rb (Tyr356) (7F10)

MMP3 antibody [EP1186Y] - Carboxyterminal end (antibody)

RRID:AB_881243

This monoclonal targets MMP3

Rabbit Anti-MnSOD Polyclonal Antibody, Unconjugated (antibody)

RRID:AB_300434

This polyclonal targets Superoxide Dismutase 2

Mouse Anti-Rb Monoclonal Antibody, Unconjugated, Clone C-2 (antibody)

RRID:AB_2177334

This monoclonal targets Rb1

Superoxide Dismutase 1 antibody (antibody)

RRID:AB_300402

This polyclonal targets Superoxide Dismutase 1 antibody

Anti-SIRT1 antibody [19A7AB4] (antibody)

RRID:AB_10864359

This monoclonal targets SIRT1

Rabbit Anti-Collagen II Polyclonal Antibody, Unconjugated (antibody)

RRID:AB_731688

This polyclonal targets Collagen II

Rabbit Anti-Collagen X Polyclonal Antibody, Unconjugated (antibody)

RRID:AB_879742

This polyclonal targets Collagen X

Rabbit Anti-Collagen I Polyclonal Antibody, Unconjugated (antibody)

RRID:AB_731684

This polyclonal targets Collagen I

PCNA antibody [EPR3821] (antibody)

RRID:AB_10561973

This monoclonal targets PCNA antibody [EPR3821]

FNpCDNA3 (plasmid)

RRID:Addgene_45346

pCMV p16 INK4A (plasmid)

RRID:Addgene_10916

GraphPad Prism (software resource)

RRID:SCR_002798

Statistical analysis software that combines scientific graphing, comprehensive curve fitting (nonlinear regression), understandable statistics, and data organization. Designed for biological research applications in pharmacology, physiology, and other biological fields for data analysis, hypothesis testing, and modeling.

SPSS (software resource)

RRID:SCR_002865

Software package used for interactive, or batched, statistical analysis in social science, health sciences and marketing. Software platform offers advanced statistical analysis, a library of machine-learning algorithms, text analysis, open-source extensibility, integration with big data and deployment into applications.Versions that were produced by SPSS Inc. before the IBM acquisition (Versions 18 and earlier) would be given origin or publisher of SPSS Inc. in Chicago.