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URL: https://github.com/BICCN/cell-locator
Proper Citation: CellLocator (RRID:SCR_022792)
Description: Open source and multi-platform pinning software tool to facilitate mapping samples into common 3D spaces. Desktop application based on 3D Slicer that displays Allen Institute for Brain Science CCF or MNI atlas, color segmented by structure of brain, and allows user to create planar polyline annotation to facilitate mapping samples into corresponding atlas.
Synonyms: CellLocator by Allen Institute
Resource Type: software application, software resource
Keywords: Desktop application based on 3D Slicer, mapping samples into common 3D spaces, Allen Institute for Brain Science CCF, MNI atlas, color segmented by structure of brain, create planar polyline annotation
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Source: SciCrunch Registry
Data set from Kravitz, Owen and Kretizer's 2012 paper "Optogenetic identification of striatal projection neuron subtypes during in vivo recordings."
