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URL: https://bioinf.eva.mpg.de/anfo/
Proper Citation: Anfo (RRID:SCR_015973)
Description: Anfo is a mapper in the spirit of Soap/Maq/Bowtie, but its implementation takes more after BLAST/BLAT. It's most useful for the alignment of sequencing reads where the DNA sequence is somehow modified (think ancient DNA or bisulphite treatment) and/or there is more divergence between sample and reference than what fast mappers will handle gracefully (say the reference genome is missing and a related species is used instead).
Synonyms: Anfo Short Read Aligner/Mapper
Resource Type: data analysis software, software application, data processing software, sequence analysis software, software resource
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Source: SciCrunch Registry
Data set from Kravitz, Owen and Kretizer's 2012 paper "Optogenetic identification of striatal projection neuron subtypes during in vivo recordings."
