Curator Dashboard

A structured controlled vocabulary for the annotation of sample processing and separation techniques in scientific experiments, such as, and including, gel electrophoresis, column chromatography, capillary electrophoresis, centrifugation and so on. Developed jointly by the HUPO Proteomics Standards Initiative and The Metabolomics Standards Initiative.

• Resource
• SciCrunch
• 13 years ago - by Anonymous

Controlled vocabulary used for various entity properties in the Synapse platform.

• Resource
• SciCrunch
• 13 years ago - by Anonymous

A general-purpose STATistics Ontology to provide coverage for processes such as statistical tests, their conditions of applications, and information needed or resulting from statistical methods, such as probability distributions, variable, spread and variation metrics. STATO also covers aspects of experimental design and description of plots and graphical representations commonly used to provide visual cues of data distribution or layout and to assist review of the results.

• Resource
• SciCrunch
• 13 years ago - by Anonymous

Ontology in the domain of role classification that aims to standardize role classification and support computer-assisted reasoning. RoleO is a community-based ontology, and its development follows the OBO Foundry principles.

• Resource
• SciCrunch
• 13 years ago - by Anonymous

Ontology of a modified version of Medical Subjects Headings Thesaurus 2014, that is an OWL representation of MeSH so that it can be integrated with other ontologies represented in OWL. It contains all terms that are in MeSH and in the MeSH concept tree, including the pharmacological actions (represented as subclass relations). Concepts in the MeSH concept tree are merged with MeSH term ids. Note that, while this ontology is composed of MeSH terms, it does not correspond directly to UMLS MeSH. In particular, a single term in UMLS MeSH often results in multiple classes in this ontology. For example, in MeSH there is a single term with the label Heart. The internal code (unique identifier) for this term is A07.541. In this ontology there are two entirely different terms, both of which have the label Heart. The codes for these terms are A07.541 and D006321.

• Resource
• SciCrunch
• 13 years ago - by Anonymous

A controlled terminology for radiology-a single unified source of radiology terms for radiology practice, education, and research. For license information see : http://www.rsna.org/uploadedFiles/RSNA/Content/Informatics/radlex_public_license_version_1-0-1.pdf Converted to use OWL format submissions

• Resource
• SciCrunch
• 13 years ago - by Anonymous

An ontology that describes various concepts in quantitative imaging biomarkers.

• Resource
• SciCrunch
• 13 years ago - by Anonymous

Collection of ontologies that define the base classes properties, and restrictions used for modeling physical quantities, units of measure, and their dimensions in various measurement systems. The goal of the QUDT ontology is to provide a unified model of, measurable quantities, units for measuring different kinds of quantities, the numerical values of quantities in different units of measure and the data structures and data types used to store and manipulate these objects in software. This OWL schema is a foundation for a basic treatment of units.

• Resource
• SciCrunch
• 13 years ago - by Anonymous

Ontology that expresses the PROV Data Model using the OWL2 Web Ontology Language (OWL2) providing a set of classes, properties, and restrictions that can be used to represent and interchange provenance information generated in different systems and under different contexts. It can also be specialized to create new classes and properties to model provenance information for different applications and domains.

• Resource
• SciCrunch
• 13 years ago - by Anonymous

A comprehensive proteomics data and process provenance ontology.

• Resource
• SciCrunch
• 13 years ago - by Anonymous

A structured controlled vocabulary for the annotation of experiments concerned with protein-protein interactions.

• Resource
• SciCrunch
• 13 years ago - by Anonymous

Ontology consisting of terms that describe protein chemical modifications, logically linked by an is_a relationship in such a way as to form a direct acyclic graph (DAG). The PSI-MOD ontology has more than 45 top-level nodes, and provides alternative hierarchical paths for classifying protein modifications either by the molecular structure of the modification, or by the amino acid residue that is modified.

• Resource
• SciCrunch
• 13 years ago - by Anonymous

Ontology of a system for tracking grants and producing reports - Users can access grant data through a query interface and a variety of pre-defined forms and reports.

• Resource
• SciCrunch
• 13 years ago - by Anonymous

A controlled vocabulary of growth and developmental stages in various plants. Note that this has been subsumed into the Plant Ontology (PO). This file is created by filtering plant_ontology_assert.obo to contain only terms from the plant structure development stage branch of the PO. For more information, please see: http://palea.cgrb.oregonstate.edu/viewsvn/Poc/tags/live/

• Resource
• SciCrunch
• 13 years ago - by Anonymous

Ontology that encodes agreement among experts about how Emergency Department (ED) chief complaints are grouped into syndromes of public health importance (consensus definitions).

• Resource
• SciCrunch
• 13 years ago - by Anonymous

THIS RESOURCES IS NO LONGER IN SERVICE, documented on April 23, 2014. REPLACED BY: Plant Ontology (PO). A controlled vocabulary of plant morphological and anatomical structures representing organs, tissues, cell types, and their biological relationships based on spatial and developmental organization. Note that this has been subsumed into the PO. This file is created by filtering plant_ontology_assert.obo to contain only terms from the plant anatomical entity branch of the PO. For more information, please see: http://palea.cgrb.oregonstate.edu/viewsvn/Poc/tags/live/

• Resource
• SciCrunch
• 13 years ago - by Anonymous

Two ontologies: methods and properties (but not objects, which are subject of the chemical ontology). The methods are applied to study the properties.

• Resource
• SciCrunch
• 13 years ago - by Anonymous

Ontology that proposes concepts and roles to represent relationships of pharmacogenomics interest.

• Resource
• SciCrunch
• 13 years ago - by Anonymous

An ontology for describing both human infectious disease caused by bacteria and the disease that is related to bacterial infection.

• Resource
• SciCrunch
• 13 years ago - by Anonymous

Vocabulary that describes a process that is the means of how a pathogen is transmitted from one host, reservoir, or source to another host. This transmission may occur either directly or indirectly and may involve animate vectors or inanimate vehicles.

• Resource
• SciCrunch
• 13 years ago - by Anonymous