Curator Dashboard

For immunohistochemistry

• Resource
• SciCrunch
• 9 years ago - submitted by Waijiao Cai

Image analysis software for developing new cellular assay analysis routines. This software provides a selection of advanced segmentation, pre-processing and post-postprocessing tools.

• SciCrunch
• 9 years ago - submitted by Maria del Mar Ortega-villaizan

Research standard treadmill that reduces gait lab space requirements and eliminates the limitations inherent in a traditional gait walkway. Researchers and clinicians can perform numerous testing conditions in a compact 2 meter space with variable incline and speed settings.

• Resource
• RRID-Legacy
• 9 years ago - by Anonymous

Software that can perform calculations on cells from fluorescence microscopy images. BlobFinder can perform two types of analysis: an average count analysis to count the number of fluorescent signals and nuclei in an image, and a single cell analysis to simulate a cytoplasm and assign each signal to a particular cell.

• Resource
• RRID-Legacy
• 9 years ago - by Anonymous

Private company offering a wide range of mass spectrometry-based proteomics data analysis services, including large-scale peptide and protein identification and quantitative proteomics. Notably, the company offers robust analysis of isobaric tagging and label-free quantification experiments, along with guidance in design of experiments and quality control issues.

• RRID-Legacy
• 9 years ago - submitted by Antonio Ramos Fernández

Software for spectral analysis and data interrogation to identify, superimpose, compare samples, and label peaks. PeakView Software supports mass spectrometer systems for qualitative review of LC-MS and MS/MS data as well as optional detectors such as UV and DAD.

• Resource
• SciCrunch
• 9 years ago - submitted by Maria del Mar Ortega-villaizan

Acquisition software for mass spectrometry data from TripleTOF instrument(s). Analyst provides functionality for instrument control, data analysis, reporting, and audit trail.

• Resource
• SciCrunch
• 9 years ago - submitted by Maria del Mar Ortega-villaizan

Data analysis software and search tool for new markers potentially associated to pathways. CluePedia calculates linear and non-linear statistical dependencies from experimental data and investigates interrelations within each pathway to reveal associations through gene/protein/miRNA enrichments.

• Resource
• SciCrunch
• 9 years ago - submitted by Maria del Mar Ortega-villaizan

Flowing Software is a Free flow cytometry data analysis software.

• Resource
• SciCrunch
• 9 years ago - submitted by Maria del Mar Ortega-villaizan

Flowing Software is a Free flow cytometry data analysis software.

• Resource
• SciCrunch
• 9 years ago - submitted by Maria del Mar Ortega-villaizan

Software for flow cytometry data analysis. Flowing Software has many common analysis tools, such as dot plots, histograms, quadrants, statistics, overlay histograms etc.

• Resource
• SciCrunch
• 9 years ago - submitted by Maria del Mar Ortega-villaizan

Simulation environment that combines flexible script language user interface with computational tools in order to setup cardiac electrophysiology in-silico experiments without re-coding at low-level. It aims to include cell excitation, tissue/anatomy models, and stimulation protocols in BeatBox scripts so that simulation run either sequentially or in parallel (MPI) without re-compilation.

• Resource
• RRID-Legacy
• 9 years ago - submitted by Irina Biktasheva

Community portal for a distributed data sharing platform and open protocol for building apps. The Dat Project imagines a web of commons created by global communities on open and secure protocols.

• Resource
• RRID-Legacy
• 9 years ago - submitted by Anita Bandrowski

Dataset of functionally characterized rice genes and members of different gene families. The dataset was created by integrating data from available databases and reviewing publications of rice functional genomic studies.

• Resource
• SciCrunch
• 9 years ago - submitted by Wen Yao

Source code for the Python implementation of the kernel Current Source Density method. The method operates in one-, two-, and three-dimensional space to perform nonparametric estimation of transmembrane current sources from local field potentials recorded from arbitrarily distributed electrodes.

• Resource
• RRID-Legacy
• 9 years ago - submitted by Daniel Wójcik

Software for metabarcoding of DNA. SOAPBarcode takes advantage of high throughput capacity of next-generation-sequencing (NGS) platforms and can characterize the biodiversity of large volumes of eukaryote samples.

• Resource
• SciCrunch
• 9 years ago - by Anonymous

Software for cluster analysis of microarray data. Genesis is a platform independent Java package of tools to simultaneously visualize and analyze a whole set of gene expression experiments.

• Resource
• RRID-Legacy
• 9 years ago - by Anonymous

Perl software for transcription factor binding site detection and analysis. It implements classes for the representation of objects encountered in analysis of these protein-binding sites.

• Resource
• SciCrunch
• 9 years ago - by Anonymous

Software for digital video camera recording that allows users to control and acquire dadta from multiple cameras simultaneously in a singleuser interface. StreamPix provides a complete management console for cameras, simplifying the setup, control and acquisition from any number and type of camera.

• Resource
• RRID-Legacy
• 9 years ago - by Anonymous

Software for read-pair simulation of 3C-based sequencing methodologies (HiC, Meta3C, DNase-HiC). Sim3C's potential applications include addressing questions directed at the spatial organization of DNA in samples of eukaryotic tissue, single cells, and microbial communities.

• Resource
• SciCrunch
• 9 years ago - submitted by Matthew DeMaere