Curator Dashboard

Manually curated database offering variability and pathogenicity information about mtDNA variants. Human mitochondrial variants data of healthy and diseased subjects.Data and text mining pipeline to annotate human mitochondrial variants with functional and clinical information.

• Resource
• RRID-Legacy
• 7 years ago - submitted by Roberto Preste

Software package that evaluates correspondence between stated sexes, relationships, and ancestries in pedigree file and those inferred from genotypes in VCF file resulting from human whole genome sequencing or whole exome sequencing studies. Facilitates both automated and interactive, visual detection of sample swaps, poor sequencing quality, and other indicators of sample problems.

• Resource
• RRID-Legacy
• 7 years ago - by Anonymous

Software tool for scalable clustering of RNAs based on sequence and secondary structures similarities. Implemented within Galaxy framework. Used for studying RNA function.

• Resource
• SciCrunch
• 7 years ago - submitted by Milad Miladi

Software tool for allowing samples that contain microbiome features to be rapidly identified. Rapid sample discovery and feature characterization system. Integrated with existing analysis tools to enable fast, large scale microbiome searches and discovery of new microbiome relationships. Service for sample metadata and sample data.

• Resource
• dkNET
• 7 years ago - submitted by Ko-Wei Lin

Open source microcontroller board based on Microchip ATmega328P microcontroller and developed by Arduino. Board is equipped with sets of digital and analog input, output pins that may be interfaced to various expansion boards and other circuits.

• Resource
• RRID-Legacy
• 7 years ago - by Anonymous

Retina inspired event based camera for low latency, real time image processing by iniVation. Works with graphical interfaces such as jAER.

• Resource
• RRID-Legacy
• 7 years ago - by Anonymous

Open source cross platform for automatic AC-PC realignment, reorientation and coregistration robust to brain damage in Statistical Parametric Mapping. Set of routines to perform auto reorient and auto coregistration in toolbox SPM12.

• Resource
• RRID-Legacy
• 7 years ago - submitted by Stephen Karl Larroque

Software platform for closed loop data acquisition, online analysis, and stimulus generation specifically designed for, but not limited to, electrophysiological recordings.

• Resource
• dkNET
• 7 years ago - submitted by Maryann Martone

Software tool that calculates key statistics and generates publication quality plots for raw PacBio Sequel data. Open source software for analyzing PacBio Sequel raw sequence data.

• Resource
• RRID-Legacy
• 7 years ago - submitted by David Hufnagel

Software package for molecular replacement protein structure solution using X-ray data. Includes database and set of programs for structure solution. Automatic molecular replacement pipeline.

• Resource
• RRID-Legacy
• 7 years ago - submitted by Lori Buetow

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.Web sevice of ClustalW provided by DNA data bank of Japan.

• Resource
• RRID-Legacy
• 7 years ago - by Anonymous

Compensator measure rotational force of tethered fly around its vertical body axis (yaw torque). Used as behavioral read-out after sensory stimulation or to control various environmental stimuli in different kinds of behavioral experiments. Measurement device uses measurement principle that is based on magnetic induction and compensates for any movement of fly.

• Resource
• RRID-Legacy
• 7 years ago - submitted by Björn Brembs

AcceGen offers most complete human and animal cell products and cell/molecular biology services for life science researchers worldwide. Cell line collections include primary cells, tumor cell lines, transfected stable cell lines, stem cells and immortalized cell lines. miRNA agomir/antagomir, nucleic acid kits, enzymes and custom cell/molecular biology services.

• Organization
• SciCrunch
• 7 years ago - submitted by Sophia Leighton

BossDB (Brain Observatory Storage Service and Database) is a cloud-based ecosystem for the storage and management of public large-scale volumetric neuroimaging and connectomics datasets. This includes volumetric Electron Microscopy and X-Ray Micro/Nanotomography data with support for multi-channel image data, segmentations, annotations, meshes, and connectomes. BossDB integrates with community resources for data access, processing, visualization, and analysis, and includes an API that enables metadata management, rendering, datatype conversions, and ingest.

• Resource
• SciCrunch
• 7 years ago - submitted by Edyta Vieth

Public, NIH-funded repository and analysis ecosystem for brain microscopy data, designed to store, share, and process massive volumetric datasets. It enables researchers to access whole-brain images, neuron morphologies, and spatial data without needing to download, fostering collaborative discovery. Used to deposit, analyze, mine, share and interact with large brain image datasets.

• Resource
• SciCrunch
• 7 years ago - submitted by Edyta Vieth

Software JAVA based application for basic analysis of Small Angle X-ray Scattering datasets.

• Resource
• RRID-Legacy
• 7 years ago - submitted by Lori Buetow

Software package to arrange multiple heatmaps and support various annotation graphics. Used to visualize associations between different sources of data sets and to reveal potential patterns.

• Resource
• RRID-Legacy
• 7 years ago - by Anonymous

Web server for computing theoretical scattering profile of structure and fitting of experimental profile. Computes SAXS profile of given atomistic model and fits it to experimental profile. Used for structural modeling applications with small angle X-ray scattering data.

• Resource
• RRID-Legacy
• 7 years ago - submitted by Lori Buetow

Searchable table of datasets. Data generated from projects through BRAIN Initiative Cell Census Network. Datasets can be filtered by species, research investigator, grant number or experimental technique. Includes links to data directories at data archives and links to protocols.

• Resource
• SciCrunch
• 7 years ago - submitted by Maryann Martone

Software pangenomics toolbox for clustering diverged orthologues in bacteria. Used to identify and classify orthologous gene families in bacterial pangenomes over wide range of sequence similarity thresholds.

• Resource
• SciCrunch
• 7 years ago - submitted by Sion Bayliss