Curator Dashboard

Python Rayleigh-Sommerfeld integral for acoustics with optional CUDA graphics processing unit (GPU) implementation.

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• SciCrunch
• 7 years ago - submitted by Edyta Vieth

Software Python package for working with Neurodata stored in Neurodata Without Borders files. Software providing API allowing users to read and create NWB formatted HDF5 files. Developed in support to NWB project with aim of spreading standardized data format for cellular based neurophysiology information.

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• SciCrunch
• 7 years ago - submitted by Edyta Vieth

Open source software neural simulation toolbox. C++ library for designing and deploying large scale neurally inspired computational models. Object oriented neural simulation toolbox optimized for high performance multi core, multi node computer architectures.

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• SciCrunch
• 7 years ago - submitted by Edyta Vieth

Software tools for converting data files into persistence diagrams and distance matrices.

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• SciCrunch
• 7 years ago - submitted by Edyta Vieth

Software for computational neurophysiology. Simulation environment is used for building and using computational models of neurons and networks of neurons. NEURON Users Group can participate in collaborative development of documentation, tutorials, and software.

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• SciCrunch
• 7 years ago - submitted by Edyta Vieth

Software package for extracting neural activity codes.

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• SciCrunch
• 7 years ago - submitted by Edyta Vieth

Software package for p value based multiple testing that also implements dependence test and p-value simulation.

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• SciCrunch
• 7 years ago - submitted by Edyta Vieth

Neurophysiological spike sorting software.

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• SciCrunch
• 7 years ago - submitted by Edyta Vieth

Software R package for estimating structural equation models using instrumental variables.

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• SciCrunch
• 7 years ago - submitted by Edyta Vieth

Software Python platform for image guided Mass Spectrometry profiling. Provides graphical user interface for automatic cell finding and point based registration from whole slide images. Simplifies single cell analysis with feature rich image processing.

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• SciCrunch
• 7 years ago - submitted by Edyta Vieth

Software package to perform causal mediation analysis under confounding or correlated errors. Includes single level mediation model, two level and three level mediation model for data with hierarchical structures. Under two or three level mediation model, correlation parameter is identifiable and is estimated based on hierarchical likelihood, marginal likelihood or two stage method.

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• SciCrunch
• 7 years ago - submitted by Edyta Vieth

Software tool for interactive graphs of high dimensional data. Interactive cloud based software tool by DIBSVIS.

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• SciCrunch
• 7 years ago - submitted by Edyta Vieth

Software open source R package for executing, evaluating and visualizing different clusterings of experimental data, including data from single cell RNA-Seq studies. Software for running and comparing different clusterings of single cell sequencing data.

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• SciCrunch
• 7 years ago - submitted by Edyta Vieth

Software Matlab toolbox for quantitative analysis of digitized brain wide gene expression data from Allen Atlas of adult mouse brain.

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• SciCrunch
• 7 years ago - submitted by Edyta Vieth

Open source software package for circuit level interpretation of human EEG/MEG data. Software tool for interpreting cellular and network origin of human MEG/EEG data. Simulates electrical activity of neocortical cells and circuits that generate primary electrical currents underlying EEG/MEG recordings. Designed for researchers and clinicians, without computational neural modeling experience, to develop and test hypothesis on circuit origin of their data.

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• SciCrunch
• 7 years ago - submitted by Edyta Vieth

Web service for automatic phonetic transcription of non-prompted speech. Ludwig Maximilian University of Munich, Munich, Germany is parent organization.

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• RRID-Legacy
• 7 years ago - by Anonymous

Database for completely identified inorganic crystal structures. Collection of known inorganic crystal structures published since 1913, including their atomic coordinates. Includes only data which have passed thorough quality checks. Tool for materials research.

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• dkNET
• 7 years ago - submitted by Ko-Wei Lin

Public repository for archiving circular dichroism spectroscopic data and associated bioinformatics and experimental metadata. For authors to deposit experimental data as well as detailed information on methods and calculations associated with published work. Includes links for each entry to bioinformatics databases. Data are freely available to accessors either as single files or as complete data bank downloads.

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• dkNET
• 7 years ago - submitted by Ko-Wei Lin

Software tool as flexible DICOM converter for organizing brain imaging data into structured directory layouts.

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• NIF
• 7 years ago - by Anonymous

Software tool to generate Dockerfiles and Singularity recipes for neuroimaging with simple command-line interface. Command line program that generates custom Dockerfiles and Singularity recipes for neuroimaging and minifies existing containers. Supports AFNI, ANTs, Convert3D, Dcm2niix, FreeSurfer, FSL, Matlab Compiler Runtime, MINC, Miniconda, MRtrix3, NeuroDebian, PETPVC, and SPM12.

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• NIF
• 7 years ago - by Anonymous