Curator Dashboard

Database by Medisapiens Ltd. as fully integrated and annotated human gene expression data source. All genes are comparable across all samples. Provides data analysis options using database of human transcriptome.

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• RRID-Legacy
• 6 years ago - by Anonymous

Database of SARS-CoV-2 and other viruses. Integrates structural and dynamic insights with viral evolution for proteins coded by virus. Each virus within database has workflow performed on each protein. Workflow consists of protein modeling, molecular dynamic simulations, evolutionary analysis, and mapping of protein-protein interactions. On page for each protein is link to individual protein data folder system, video of protein rotating with conservation, details of protein function, widget to purchase 3D print of protein at cost of production, amino acid movement from molecular dynamic simulations, and table of data for each amino acid of protein.

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• RRID-Legacy
• 6 years ago - by Anonymous

Web interface for simulation of biological molecular networks. Web based environment for creation and simulation of reaction-diffusion models integrated with molecular repository. Allows to import, combine and simulate existing models expressed with BNGL and SBML languages. Application is integrated with number of solvers for reaction-diffusion systems of equations.

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• RRID-Legacy
• 6 years ago - submitted by Daniel Keller

Website for study pre-registration. Defines minimum required criteria for pre-registration and allows authors to pre-register their study. It is standardized pre-registration that requires only what is necessary to separate exploratory from confirmatory analyses.

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• RRID-Legacy
• 6 years ago - submitted by Tracey Weissgerber

Guidelines for strengthening reporting of observational studies in epidemiology. International, collaborative initiative of epidemiologists, methodologists, statisticians, researchers and journal editors involved in developing recommendations on what should be included in accurate and complete report of observational study. Recommendations to cover study designs in cohort, case-control, and cross-sectional studies.

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• RRID-Legacy
• 6 years ago - submitted by Tracey Weissgerber

Guidelines to improve planning of animal experiments. Covers areas which determine quality of preparation for animal studies including formulation, dialogue between scientists and animal facility, and quality control of various components in study.Includes harm–benefit assessment, health risks, waste disposal and decontamination, quarantine and health monitoring,use of humane endpoints, fate of animals like humane killing, release, re-use or re-homing, and necropsy.

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• RRID-Legacy
• 6 years ago - submitted by Tracey Weissgerber

Software tool to predict lipophilicity and aqueous solubility of molecules. ALOGPS 2.1 can increase its prediction for molecules up to 5 times LIBRARY mode. You can create and use your own LIBRARY.

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• RRID-Legacy
• 6 years ago - by Anonymous

Core provides collection of diversity-oriented, drug-like, and natural small molecules in non-redundant libraries, variety of automated liquid handling and assay detection systems such as EnVision Multiplate reader and ArrayScan HCA System, modern equipment for medicinal and analytical chemistry including NMR, LC-QTOF MS, HPLC, Peptide Synthesizer, and sophisticated chemoinformatics tools. Besides traditional high-throughput screening and hit compound optimization services, newly adapted technologies include arrayed CRISPR screening, phage display, and SAR by NMR.

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• SciCrunch
• 6 years ago - submitted by Edyta Vieth

Linear electrode array used for intracranial electrophysiological recordings. V-Probe is multi-use, multi-site, linear electrode with recording sites positioned on side of sharpened, symmetric cone by Plexon Inc. Minimizes trauma to brain tissue upon insertion. Durable, highly customizable, and often used in acute research with medium to large animals.

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• RRID-Legacy
• 6 years ago - by Anonymous

Headstage that attaches to 16-channel linear electrode arrays by Plexon Inc. Digitizes analog voltage signals and outputs them to data acquisition systems.

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• RRID-Legacy
• 6 years ago - by Anonymous

Driver system for electrode wires or linear electrode arrays. Microdrive system for extracellular recordings by Thomas RECORDING GmbH. Can be used with different conventional extracellular recording electrodes and preamplifier systems. MEM System is adapted to special requirements e.g. MEM holder is customized so that it fits to your stereotaxic instrument.

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• RRID-Legacy
• 6 years ago - by Anonymous

Web tool for prediction of surface accessibility, secondary structure, disorder, and phi/psi dihedral angles of amino acids in amino acid sequence. Used to predict solvent accessibility, secondary structure, structural disorder, and backbone dihedral angles for each residue of input sequences.

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• RRID-Legacy
• 6 years ago - by Anonymous

Web tool for prediction of allergens based on similarity of known epitope with any region of protein. Used for prediction of allergenic proteins and mapping of IgE epitopes.

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• RRID-Legacy
• 6 years ago - by Anonymous

Web tool as sequence-based, alignment-free and pathogen-independent predictor of protein antigenicity.Predicts likelihood that protein is protective antigen. Integrated in SCRATCH suite of predictors.

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• RRID-Legacy
• 6 years ago - by Anonymous

Web tool for secondary structure prediction. Used for network protein sequence analysis.

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• RRID-Legacy
• 6 years ago - by Anonymous

Computer algorithm for ab initio protein structure prediction and protein peptide folding, which aims to construct correct protein 3D model from amino acid sequence only. Server is suitable for proteins that do not have homologous templates in PDB library.

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• RRID-Legacy
• 6 years ago - by Anonymous

Software R package to run minimum hypergeometric test.

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• RRID-Legacy
• 6 years ago - by Anonymous

Web prediction tool for molecular binding in simulation of immune system. Agent based simulator of immune response that represents pathogens, as well as lymphocytes receptors, by means of their amino acid sequences and makes use of bioinformatics methods for T and B cell epitope prediction.Calculates immune response to generic pathogenic secondary structure. Allows users to submit antigen protein sequence and specify schedule of its injection as well as host haplotype.

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• RRID-Legacy
• 6 years ago - by Anonymous

Software experimental data table management system to make research data accessible and available for reuse with minimal effort on part of data provider. Allows any scientist or data researcher to be able to explore dataset and then extract some or all of data according to their needs. Designed to manage experimental data tables in quick and easy way for users.

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• SciCrunch
• 6 years ago - submitted by Daniel Jacob

Provides data integrity using blockchain. Used for protecting integrity and provenance of research data.Open science chain utilizes distributed ledger technology (consortium blockchain) to securely store information about scientific data including its provenance to enable independent verification of its authenticity to establish trust in the research community.

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• RRID-Legacy
• 6 years ago - by Anonymous