Curator Dashboard

Software set of tools used in production and exploration of bacterial artificial chromosome restriction maps.

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• RRID
• 3 years ago - submitted by Eamon Winden

Cyclic IMS pairs unique cyclic ion mobility separation which enables separation based on shape, with time-of-flight separation based on mass to charge ratio (m/z). It is equipped with DESI and electrospray sources for surface and solution analyses.

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• SciCrunch
• 3 years ago - submitted by Edyta Vieth

Multi Reflecting Time-of-Flight features routine ppb mass accuracy and ultra-high resolution by extending the flight path via gridless electrostatic mirrors in mass analyzer. It is equipped with DESI and MALDI sources for imaging mass spectrometry.

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• SciCrunch
• 3 years ago - submitted by Edyta Vieth

Agilent 6495C triple quadrupole LC/MS system increases capacity and sensitivity for targeted quantitation applications. Used to investigate more diverse and biologically relevant groups of targeted peptides, small molecules and metabolites in single experiment without compromising sensitivity, quantitative accuracy, or linearity.

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• SciCrunch
• 3 years ago - submitted by Edyta Vieth

Open source raw data file toolkit for mass spectrometry data analysis, provided by the BioNovoGene corporation. The features of mzkit inlcudes: raw data file content viewer(XIC/TIC/Mass spectrum plot/MS-Imaging), build molecule network, formula de-novo search, de-novo annotation of the unknown metabolite features, MALDI single cell metabolomics data analysis, pathological slide viewer and targeted data quantification.

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• RRID
• 3 years ago - by Anonymous

Software tool accurately classifies personal names by gender, country of origin or ethnicity. Can infer gender, translate Chinese names and Japanese names, format phone number, and split full name via user interface and API. Used as name checker for gender, origin and ethnicity determination.

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• RRID
• 3 years ago - submitted by Anita Bandrowski

Open source video annotation software that is suitable for research, teaching, or learning.

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• RRID
• 3 years ago - by Anonymous

THIS TEST is a

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• NIF
• 3 years ago - by Anonymous

Drug discovery platform to integrate visualization, modeling and simulation in single package. Integrated computer aided molecular design platform.

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• RRID
• 3 years ago - by Anonymous

Cancer research platform that aggregates clinical, genomic and functional data from various types of patient derived cancer models, xenographs, organoids and cell lines. Open catalog of harmonised patient-derived cancer models. Standardises, harmonises and integrates clinical metadata, molecular and treatment-based data from academic and commercial providers worldwide. Data is FAIR and underpins generation and testing of new hypotheses in cancer mechanisms and personalised medicine development. PDCM Finder have expanded to organoids and cell lines and is now called CancerModels.Org. PDCM Finder was launched in April 2022 as successor of PDX Finder portal, which focused solely on patient-derived xenograft models.

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• SciCrunch
• 3 years ago - by Anonymous

Advanced infusion device for drug delivery applications in mice, rats and larger animals. With versatile programmable functions and refillable reservoir, this implantable infusion pump enables full control over dosing studies and empowers researchers to execute even the most complex dosing protocols, including multiple bolus dosing, variable/constant delivery, escalating drug administration, and more.

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• dkNET
• 3 years ago - submitted by Mahad Ahmed

Syringe pump is built with 2 separate pump drives capable of independent pulseless, reproducible rates and movement. Programmable multi-step and cycle mode allows users to input complex flow profiles or perform flow cycling from computer Labview or the pump itself. This multi-channel syringe infusion pump system also can be expanded with 2-syringe push and pull rack attachment to increase the total syringe capacity to four.

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• dkNET
• 3 years ago - submitted by Mahad Ahmed

Software conformational search method for efficient generation of bioactive conformers. Used for generating conformations for ligand-based virtual screening in molecular modeling and in drug discovery. Schrödinger has completely rewritten the ConfGen application for producing diverse, low-energy 3D structures of compounds and to improve recovery of bioactive conformations among generated conformers and drastically speed conformer generation.

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• RRID
• 3 years ago - by Anonymous

Antibody for western blot or inmunoprecipitation.

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• RRID
• 3 years ago - submitted by Zhihui Ma

Antibody for western blot or inmunoprecipitation.

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• RRID
• 3 years ago - submitted by Zhihui Ma

Browser serves as repository of variants across exomes and targeted panel sequencing of individuals with polycystic kidney disease. Used to aggregate and harmonize exome and genome sequencing data from sequencing projects of PKD and to make summary data available to the wider scientific community.

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• dkNET
• 3 years ago - submitted by Ko-Wei Lin

Curated data resource of protein carbonylation sites.Manually curated data resource of experimentally confirmed carbonylated proteins and sites.Provides information on other related resources such as list of other oxidative protein modification databases, list of protein oxidation and carbonylation prediction tools.

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• RRID
• 3 years ago - by Anonymous

MJFF in partnership with Aligning Science Across Parkinson’s are in the process of establishing data platform, CRN Cloud, leveraging Verily Workbench to share data generated by researcher labs funded through ASAP Collaborative Research Network. The data types include mainly raw and processed single cell RNA-seq, single nucleus RNA-seq, and bulk RNA-seq from both PD and healthy control samples.

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• RRID
• 3 years ago - by Anonymous

Software for mouse colony management. Streamlined software for simplified colony management.

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• RRID
• 3 years ago - by Anonymous

Software tool monitors metrics available in sequencer, state of the computer to which the sequencer is connected, and the contents of the fast5 and fastq files. Real-time monitoring of Oxford Nanopore Technology sequencing run. Used for monitoring nanopore sequencing process.

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• SciCrunch
• 3 years ago - by Anonymous