Curator Dashboard

Software that automatically validates peptide assignments to MS/MS spectra made by database search programs such as SEQUEST.

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• SciCrunch
• 12 years ago - by Anonymous

A freely available complete software platform for comprehensive and integrated analysis and visualization of large proteomics datasets.

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• SciCrunch
• 12 years ago - by Anonymous

Software implementing a fast and accurate progressive clustering algorithm that relies on a grammar-based sequence distance and is particularly useful in clustering large datasets.

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• SciCrunch
• 13 years ago - by Anonymous

An R software package implementing a bayesian sparse factor model for the joint analysis of paired datasets, the gene expression and drug sensitivity profiles, measured across the same panel of samples, e.g. cell lines.

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• SciCrunch
• 13 years ago - by Anonymous

A software tool to generate simulated single-end or paired-end RNA-Seq reads. # It allows users to randomly assign expression levels of transcripts and generate simulated single-end or paired-end RNA-Seq reads. # It is able to generate RNA-Seq reads that have a specified positional bias profile. # It is able to simulate random read errors from sequencing platforms. # The simulator consists of a few simple Python scripts. All scripts are command line driven, allowing users to invoke and design more functions.

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• SciCrunch
• 13 years ago - by Anonymous

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on July 31,2025. An online atlas of neural function, maintained by Cambridge University and the MRC Cognition and Brain Sciences Unit (CBSU).

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• SciCrunch
• 12 years ago - by Anonymous

An XML-based format for encoding simulation experiments. SED-ML allows to define the models to use, the experimental tasks to run and which results to produce.

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• SciCrunch
• 12 years ago - by Anonymous

A software tool for the proteomics community that may help improving analysis of proteomic experimental data.

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• SciCrunch
• 12 years ago - by Anonymous

Software that provides (Quantitiave) analysis of multiple ls-ms(ms) runs, using mzXML import of raw data coming from spectrometers.

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• SciCrunch
• 12 years ago - by Anonymous

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on August 31, 2023. Web service for performing microarray classification. It aims at finding the best prediction among different classification methods by using randomizations of the benchmarking dataset.

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• SciCrunch
• 13 years ago - by Anonymous

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on April 10th,2023. Private medical school in Buenos Aires that offers degree programs in the medical sciences. Resource is in Spanish.

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• SciCrunch
• 15 years ago - submitted by Andrea Stagg

Software that evaluates the sequence around differentially regulated alternative exons to identify clusters of short and degenerate sequences, referred to as multivalent RNA motifs.

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• SciCrunch
• 13 years ago - by Anonymous

Software package for quantifying gene and isoform abundances from single end or paired end RNA Seq data. Accurate transcript quantification from RNA Seq data with or without reference genome. Used for accurate quantification of gene and isoform expression from RNA-Seq data.

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• SciCrunch
• 13 years ago - by Anonymous

A public university, which is a part of the University of Dublin, and contains three main academic disciplines: Arts, Humanities and Social Sciences; Engineering, Mathematics and Sciences; and Health Sciences. The institution offers degrees at the undergraduate and graduate level.

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• SciCrunch
• 16 years ago - submitted by Andrea Stagg

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on July 31,2025. Molecular Horizons members are supported by laboratories and facilities. These include Laser Chemistry Laboratory, NMR Facility, Mass Spectrometry Facility, X-Ray Laboratory, Spectroscopy facilities. Other Major Equipment and facilities are available at Illawarra Health and Medical Research Institute.

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• SciCrunch
• 13 years ago - by Anonymous

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on August 30,2022. Java software that integrates browsing of genomic sequences, features, and data with DNA motif visualization and analysis.

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• SciCrunch
• 13 years ago - by Anonymous

A public university in India that has several schools focused on different areas of study, including but not limited to: management, technology, physical and chemical sciences, social sciences and international studies. The university houses a Central Instrumentation Facility that provides three services: the Mechanical Shop, the Glass blowing Shop and the Electrical Shop, all of which provide support in the repair and servicing of scientific equipment as well as the fabrication of components for experimental setups.

• Organization
• SciCrunch
• 12 years ago - submitted by Andrea Stagg

A private university in Puerto Rico which offers graduate degrees in medicine, clinical psychology, biomedical sciences, medical sciences and public health. The Ponce Research Institute, housed at the university, does research in basic, behavioral, public health and clinical sciences, focusing on areas such as non-communicable diseases, health disparities, and community health and outreach.

• Organization
• SciCrunch
• 13 years ago - submitted by Andrea Stagg

Public university in Spain that offers programs in social sciences and humanities, health and life sciences, international training in communication and communication sciences. Has colleges based on topics such as law, translation and interpretation, and engineering. Research is organized into economics and business, experimental sciences and health, law.

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• SciCrunch
• 17 years ago - submitted by Eddy Kim

A technical university in Spain which offers degree programs in 14 different faculties, including business administration, computer science and industrial engineering at the undergraduate, graduate and postdoctoral level. The school has five different campuses.

• Organization
• SciCrunch
• 13 years ago - submitted by Andrea Stagg