Curator Dashboard

• Organization
• SciCrunch
• 16 years ago - submitted by Stephen Larson

Public research university located in Freiburg im Breisgau, Baden-Württemberg, Germany.

• Organization
• SciCrunch
• 17 years ago - submitted by Andrea Stagg

This program is developed for predicting a query sequence with hairpin structure as a real miRNA precursor or not. The triplet-SVM classifier analyzes the triplet elements of the query and predicts it using a SVM classifier. The SVM classifier is previously trained based on the triplet element features of a set of real miRNA precursors and a set of pseudo-miRNA hairpins. triplet-SVM classifier was written by Chenghai Xue and is free to all users but without any warranty.

• Resource
• SciCrunch
• 16 years ago - by Anonymous

Life Extension is a global authority on nutrition, health and wellness as well as a provider of scientific information on anti-aging supplements and therapies. We supply only the highest quality nutritional supplements, including minerals, vitamins, herbs and hormones. Life Extension publishes the very latest information on anti-aging and wellness in its monthly publication, Life Extension Magazine, the Disease Prevention and Treatment book of integrative health protocols, the Life Extension Update e-mail newsletter and the Daily Health Bulletin, and at this website. All to support more informed health choices. In addition to a wealth of information, Life Extension offers 300+ premium-quality vitamins, minerals, hormones, diet and nutritional supplements, and even skin care products, which are often the fruits of research reported on or funded by the Life Extension Foundation.

• Resource
• SciCrunch
• 16 years ago - by Anonymous

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on January 11, 2023. An autopsy-based, research-devoted brain bank, biobank and biospecimen bank that derives its human donors from the Arizona Study of Aging and Neurodegenerative Disease (AZSAND), a longitudinal clinicopathological study of the health and diseases of elderly volunteers living in Maricopa county and metropolitan Phoenix, Arizona. Their function is studied during life and their organs and tissue after death. To date, they have concentrated their studies on Alzheimer's disease, Parkinson's disease, heart disease and cancer. They share the banked tissue, biomaterials and biospecimens with qualified researchers worldwide. Registrants with suitable scientific credentials will be allowed access to a database of available tissue linked to relevant clinical information, and will allow tissue requests to be initiated., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.

• Resource
• SciCrunch
• 13 years ago - by Anonymous

Fonstein, Kogan, Osterman, Overbeek and Vonstein found the non-profit Fellowship for Interpretation of Genomes (FIG) to follow their vision of seeking advances in understanding through comparative analysis of the growing body of genomic data. The team at FIG began a new open source comparative genomics environment, the SEED. The Project to Annotate 1000 Genomes is a central goal of FIG. FIG is a nonprofit organization devoted to providing support for those analyzing genomes. It focuses on organizing the data needed to support interpretation of genomes, providing the infrastructure needed by the world community in its efforts to achieve understanding. FIG offers the key services required to architect and implement a comparative framework for interpreting genomes. In addition, we pick specific, critical problems and attempt to actively participate in the unraveling of the secrets within these amazing entities. It is only by merging the work of building infrastructure with the applications that use it that we will more deeply understand what is needed at each step.

• Resource
• SciCrunch
• 16 years ago - by Anonymous

The MiND: Metadata in NIfTI for DWI framework enables data sharing and software interoperability for diffusion-weighted MRI. This site provides specification details, tools, and examples of the MiND mechanism for representing important metadata for DWI data sets at various stages of post-processing. MiND framework provides a practical solution to the problem of interoperability between DWI analysis tools, and it effectively expands the analysis options available to end users. To assist both users and developers in working with MiND-formatted files, we provide a number of software tools for download. * MiNDHeader A utility for inspecting MiND-extended files. * I/O Libraries Programming libraries to simplify writing and parsing MiND-formatted data. * Sample Files Example files for each MiND schema. * DIRAC LONI''s Diffusion Imaging Reconstruction and Analysis Collection is a DWI processing suite which utilizes the MiND framework.

• Resource
• SciCrunch
• 15 years ago - by Anonymous

Private research university with its main campus in Macon, Georgia. Founded in 1833 as Mercer Institute and gaining university status in 1837.

• Organization
• SciCrunch
• 13 years ago - submitted by Eddy Kim

A small, upper level ontology that is designed for use in supporting information retrieval, analysis and integration in scientific and other domains. BFO is a genuine upper integration in scientific and other domains. Thus it does not contain physical, chemical, biological or other terms which would properly fall within the coverage domains of the special sciences.

• Resource
• SciCrunch
• 16 years ago - by Anonymous

TrackVis is software tool that can visualize and analyze fiber track data from diffusion MR imaging (DTI/DSI/HARDI/Q-Ball) tractography. It does NOT perform actual fiber tracking. Diffusion Toolkit is a set of tools that reconstruct diffusion imaging data and generate fiber track data for TrackVis to visualize. Because these two sets of tools were developed and maintained separately and each has distinguished funtionalities, they decided to distribute them as two separate programs for the ease of maintenance and upgrade. You do need both of them to perform complete diffusion data processing and analysis. Features of TrackVis include: * Cross-platform. Works on Windows, Mac OS X and Linux with native look and feel. * A variety of track filters (track selecting methods) allowing users to explore and locate specific bundles with ease. * Multiple rendering modes with customizable scalar-driven color codes. * Real-time parameter adjustment and 3D render. * Open format of the track data file allowing users to integrate customized scalar data into the track file and visualize and analyze it. Save and restore scenes in XML style scene file. * Statistical scalar analysis of tracks and ROIs. * Synchronized real-time multiple dataset analysis and display allowing time-point and/or subject comparison. Synchronized analysis and display on same dataset can also be performed in real-time remotely over the network. * Upfront in-line parameter adjustment in real-time. No tedious pop-up dialogs. TrackVis works with Track File created by Diffusion Toolkit. Diffusion Toolkit processes raw DICOM, Nifti format and ANALYZE images. TrackVis and Diffusion Toolkit are cross-platform software. They can run on Windows XP, Mac OS X as well as Linux.

• Resource
• SciCrunch
• 15 years ago - by Anonymous

Public registry of nucleic acid reagents designed for use in a wide variety of biomedical research applications including genotyping, gene expression studies, SNP discovery, genome mapping, and gene silencing. Probe records contain information on reagent distributors, probe effectiveness, and computed sequence similarities. The database is constantly updated, with over 11,000,000 probes available. Users may deposit their data into NCBI Probe Database.

• Resource
• SciCrunch
• 13 years ago - by Anonymous

The Alaska Brain Injury Network, Inc (ABIN) is a non-profit organization dedicated to Alaskans whose lives have been changed by brain injury. The ABIN mission is to educate, plan, coordinate, and advocate for services for the survivors of traumatic brain injury and their families. ABIN''s Board of 18 directors represents all regions of Alaska, and at least 50 percent are TBI survivors or family members. ABIN has two primary functions: TBI Advisory Board and TBI Resource Navigation Agency. Advisory Board -Visit both urban and rural communities, and listen to the stories that the public shares about the issues facing Alaskans with brain injuries. -Collaborate with our partner boards to affect changes in policies to improve programs and services. -Advocate for safety legislation, in-state brain injury rehabilitation, and TBI Waiver services. -Bring TBI professional training to Alaska. -Conduct ''needs assessment'' surveys of survivors, family members, and health workers. -Maintain up to date information on emerging issues identified through callers, public testimony, and the media. Resource Navigation (Information and Referral) -Respond to requests for assistance, information, resources, and referral. -Distribute a brain injury resource directory with statewide and local resources and supports available to individuals, families, friends, professionals, caregivers and the general public. -Work to establish a TBI hotline and brain injury support groups. -Distribute educational and informational resources to the public.

• Resource
• SciCrunch
• 15 years ago - by Anonymous

An automated analysis platform for metagenomes providing quantitative insights into microbial populations based on sequence data. The server primarily provides upload, quality control, automated annotation and analysis for prokaryotic metagenomic shotgun samples.

• Resource
• SciCrunch
• 13 years ago - by Anonymous

A software pipeline for the analysis of microRNA Deep Sequencing data.

• Resource
• SciCrunch
• 13 years ago - by Anonymous

Software for split read (reads which span across a structrual variant -- SV ) mapping and SV calling from the mapping result. It is able to detect small insertions and abitrary size deletions, inversions and tandom duplications with the direction of discordant read pairs. PRISM_CTX is a tool for detecting inter-chromosome trans-location events.

• Resource
• SciCrunch
• 13 years ago - by Anonymous

A biomaterial supply resource which collects, stores, and distributes donated tissue to research scientists around the world. Collection occurs through the an anatomical donor program which accepts tissue donation from people with neurological/ psychiatric disorders. The Center also provides a continuous boost to biomedical research by providing high quality and quantity of pre- and post-mortem brains, spinal cords, cerebrospinal fluid (CSF), serum, blood cells and urine to use in investigations of neurological and psychiatric diseases. Scientists without a clinical site may use the Center''s readily available, high quality banked specimens.

• Resource
• SciCrunch
• 17 years ago - by Anonymous

Wiki forum providing an extensive catalogue of manually categorized analysis tools, technologies and information about service providers, maintained by the members of the SEQanswers community. * Minimum Information about a high-throughput Sequencing Experiment * Software Hub: The place to add to, edit or browse the software database on SEQwiki. * Service Providers: Browse or edit the list of NGS service facilities. * How-to Hub: Mini reviews for the most used tools broken down by common tasks. * Developers Hub: The place to discuss the development of the SEQwiki site and its associated data. See also publishing SEQ*. * Publications: Publication about SEQwiki and selected citations.

• Resource
• SciCrunch
• 15 years ago - by Anonymous

Bio-Mixer is a web-based environment that supports the flexible exploration of biomedical ontologies. The concepts in the ontologies and their mappings can be explored in different views such as graph views, lists and timeline views. Drag-and-drop interaction can be used to show items and collections in different views, to create filtered views and to synchronize selections. Bio-Mixer enhances drag and drop with a new drop target highlighting and preview approach to make working with multiple collections and views easy. Bio-Mixer also provides support for ontology annotation and workspace sharing between collaborators. For more information, visit code.google.com/p/bio-mixer/

• Resource
• SciCrunch
• 16 years ago - by Anonymous

An information resource and user-driven community focused on all aspects of next-generation genomics. They hope to become the central location for next generation sequencing technology discussion and education. The site will always attempt to cater to everyone, regardless of scientific background or knowledge. The High-Throughput Sequencing Map site was conceived by James Hadfield (Cancer Research UK, Cambridge) and built by Nick Loman (University of Birmingham). The database is as only as good as you, the users.

• Resource
• SciCrunch
• 15 years ago - by Anonymous

A cross-database search service for Drosophila gene expression data, including microarray data from FlyAtlas and in situ images from BDGP and Fly-TED. The applications provide different ways to search for and compare gene expression data for the fruit fly Drosophila melanogaster. You may Search Gene Expression Data by Gene, Gene Batch, and by Tissue Expression Profile. A number of Web services (SPARQL endpoints) are provided from this site which may be queried programmatically for data.

• Resource
• SciCrunch
• 16 years ago - by Anonymous