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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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egl-43(bmd136[LoxP::gfp::egl-43(long)]) II. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00047250 | Caenorhabditis elegans | egl-43(bmd136[LoxP::gfp::egl-43(long)]) II. | GFP reporter inserted into N-terminus of endogenous egl-43 locus specifically tags the long isoform. Reference: Medwig-Kinney TN, et al. Development. 2020 Jan 2;147(1).|"Made_by: Taylor N. Medwig-Kinney" | WBGene00001207(egl-43) | WBGene00001207(egl-43) | WB-STRAIN:WBStrain00047250 | WormBase (WB) | WB | unknown | 2026-09-05 04:56:13 | 0 | ||||
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daf-15(re147[daf-15::mNG::2xHA]) IV. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00047253 | Caenorhabditis elegans | daf-15(re147[daf-15::mNG::2xHA]) IV. | Made_by: Tam Duong|"mNeonGreen tag inserted at 3' end of endogenous daf-15 locus. Ubiquitous expression." | WBGene00000911(daf-15) | WBGene00000911(daf-15) | WB-STRAIN:WBStrain00047253 | WormBase (WB) | WB | unknown | 2026-09-05 04:56:13 | 0 | ||||
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micu-1(ju1155) IV/nT1 [qIs51] (IV;V). Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00047243 | Caenorhabditis elegans | micu-1(ju1155) IV/nT1 [qIs51] (IV;V). | Heterozygotes are WT with pharyngeal GFP signal, and segregate WT GFP, arrested nT1[qIs51] aneuploids, and non-GFP micu-1 homozygotes. Homozygous nT1[qIs51] inviable. Pick WT GFP and check for correct segregation of progeny to maintain. Reference: Tang NH, et al. Curr Biol. 2020 Jan 15. pii: S0960-9822(19)31694-X. doi: 10.1016/j.cub.2019.12.061. | WBGene00013462(micu-1) | WBGene00013462(micu-1) | WB-STRAIN:WBStrain00047243 | WormBase (WB) | WB | unknown | 2026-09-05 04:56:13 | 0 | ||||
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micu-1(ju1783[micu-1::gfp]) IV. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00047244 | Caenorhabditis elegans | micu-1(ju1783[micu-1::gfp]) IV. | GFP reporter inserted into C-terminus of endogenous micu-1 locus. Diffuse GFP signals throughout the body. Reference: Tang NH, et al. Curr Biol. 2020 Jan 15. pii: S0960-9822(19)31694-X. doi: 10.1016/j.cub.2019.12.061. | WBGene00013462(micu-1) | WBGene00013462(micu-1) | WB-STRAIN:WBStrain00047244 | WormBase (WB) | WB | unknown | PMID:31983639 | 2026-09-05 04:56:13 | 0 | |||
|
egl-43(bmd88[LoxP::gfp::egl-43]) II. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00047248 | Caenorhabditis elegans | egl-43(bmd88[LoxP::gfp::egl-43]) II. | GFP reporter inserted internally into endogenous egl-43 locus. Reference: Medwig-Kinney TN, et al. Development. 2020 Jan 2;147(1).|"GFP::EGL-43 endogenous tag"|"Made_by: Taylor N. Medwig-Kinney" | WBGene00001207(egl-43) | WBGene00001207(egl-43) | WB-STRAIN:WBStrain00047248 | WormBase (WB) | WB | unknown | PMID:37039075 | 2026-09-05 04:56:13 | 0 | |||
|
hlh-2(bmd90[LoxP::GFP::hlh-2]) I. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00047249 | Caenorhabditis elegans | hlh-2(bmd90[LoxP::GFP::hlh-2]) I. | GFP reporter inserted into N-terminus of endogenous hlh-2 locus. Reference: Medwig-Kinney TN, et al. Development. 2020 Jan 2;147(1).|"GFP::HLH-2 endogenous tag"|"Made_by: Taylor N. Medwig-Kinney" | WBGene00001949(hlh-2) | WBGene00001949(hlh-2) | WB-STRAIN:WBStrain00047249 | WormBase (WB) | WB | unknown | PMID:37039075 | 2026-09-05 04:56:13 | 0 | |||
|
reSi5 I. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00047260 | Caenorhabditis elegans | reSi5 I. | Made_by: Tam Duong|"reSi5 [ges-1p::TIR1::F2A::mTagBFP2::AID*::NLS::tbb-2 3'UTR] (I:-5.32). Intestinal-specific expression of TIR1 co-factor for AID, and tissue-specific AID-tagged blue protein in intestinal nuclei."|"WBStrain mapped, WBPaper00061130 added based on AFP_Strain data." | WB-STRAIN:WBStrain00047260 | WormBase (WB) | WB | unknown | PMID:33677541 | 2026-09-05 04:56:13 | 0 | |||||
|
reSi12 II. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00047263 | Caenorhabditis elegans | reSi12 II. | Made_by: Tam Duong|"reSi12 [ges-1p::TIR1::F2A::mTagBFP2::AID*::NLS::tbb-2 3'UTR] (II:0.77). Intestinal-specific expression of TIR1 co-factor for AID, and tissue-specific AID-tagged blue protein in intestinal nuclei." | WB-STRAIN:WBStrain00047263 | WormBase (WB) | WB | unknown | 2026-09-05 04:56:13 | 0 | ||||||
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egxSi126 I; unc-119(ed3) III Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00047264 | Caenorhabditis elegans | egxSi126 I; unc-119(ed3) III | egxSi126 [mex-5p::hsp-3(aa1-19)::halotag::HDEL::pie-1 3UTR + unc-119(+)] I. Superficially wild-type. Stable expression of Halotag in the ER lumen in the germline and embryos. Reference: Fan X, et al. G3 (accepted).|"Made_by: Xintao Fan" | WBGene00006843(unc-119) | WBGene00006843(unc-119) | WB-STRAIN:WBStrain00047264 | WormBase (WB) | WB | unknown | 2026-09-05 04:56:13 | 0 | ||||
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daf-15(re257[daf-15::mNG::AID]) IV. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00047255 | Caenorhabditis elegans | daf-15(re257[daf-15::mNG::AID]) IV. | Made_by: Tam Duong|"mNeonGreen tag inserted at 3' end of endogenous daf-15 locus; AID at 3' end of mNeonGreen. Ubiquitous expression. Transgene can be degraded in a background expressing TIR1 co-factor and supplemented with auxin." | WBGene00000911(daf-15) | WBGene00000911(daf-15) | WB-STRAIN:WBStrain00047255 | WormBase (WB) | WB | unknown | 2026-09-05 04:56:13 | 0 | ||||
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reSi1[col-10p::TIR1::F2A::mTagBFP2::AID*::NLS::tbb-2 3'UTR] I:-5.32 Resource Report Resource Website 1+ mentions |
RRID:WB-STRAIN:WBStrain00047257 | Caenorhabditis elegans | reSi1[col-10p::TIR1::F2A::mTagBFP2::AID*::NLS::tbb-2 3'UTR] I:-5.32 | Made_by: Tam Duong|"reSi1 [col-10p::TIR1::F2A::mTagBFP2::AID*::NLS::tbb-2 3'UTR] (I:-5.32). Hypodermal-specific expression of TIR1 co-factor for AID, and tissue-specific AID-tagged blue protein in hypodermal nuclei."|"Supplementary_genotype reSi1 [col-10p::TIR1::F2A::mTagBFP2:: AID*::NLS::tbb-2 3'UTR] I"|"Supplementary_genotype reSi1[Pcol-10::TIR1::F2A::mTagBFP2::AID*::NLS::tbb-2 3'UTR]"|"WBStrain mapped, WBPaper00061130 added based on AFP_Strain data." | WB-STRAIN:WBStrain00047257 | WormBase (WB) | WB | unknown | PMID:33677541 PMID:37651423 PMID:37773960 PMID:38483995 |
2026-09-05 04:56:13 | 1 | |||||
|
mir-785(umn32[lox2272 myo-2p::wrmScarlet + lox511I sqt-1(d) hsp::CRE HygR Lox511I + Lox2272]) X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00047237 | Caenorhabditis elegans | mir-785(umn32[lox2272 myo-2p::wrmScarlet + lox511I sqt-1(d) hsp::CRE HygR Lox511I + Lox2272]) X. | Made_by: Julie Knott & Marcus Vargas|"mir-785 pre-miRNA deletion strain deletion allele in which mir-785 pre-miRNA was replaced by myo-2p::wrmScarlet. Rollers. Generated in parental strain N2. [NOTE: Low levels of Cre activity can lead to excision of the SEC, causing the strain to lose the Roll phentoype. Pick Rollers to retain full transgene cassette.]" | WBGene00003514(myo-2)|WBGene00005016(sqt-1)|WBGene00045342(mir-785) | WBGene00003514(myo-2), WBGene00005016(sqt-1), WBGene00045342(mir-785) | WB-STRAIN:WBStrain00047237 | WormBase (WB) | WB | unknown | 2026-09-05 04:56:13 | 0 | ||||
|
mir-356(umn42[lox2272 myo-2p::wrmScarlet + lox511I sqt-1(d) hsp::CRE HygR LoX511I + Lox2272]) III. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00047239 | Caenorhabditis elegans | mir-356(umn42[lox2272 myo-2p::wrmScarlet + lox511I sqt-1(d) hsp::CRE HygR LoX511I + Lox2272]) III. | Made_by: Julie Knott & Marcus Vargas|"mir-356 pre-miRNA deletion strain deletion allele in which mir-356 pre-miRNA was replaced by myo-2p::wrmScarlet. Rollers. Generated in parental strain N2. [NOTE: Low levels of Cre activity can lead to excision of the SEC, causing the strain to lose the Roll phentoype. Pick Rollers to retain full transgene cassette.]" | WBGene00003514(myo-2)|WBGene00005016(sqt-1) | WBGene00003514(myo-2), WBGene00005016(sqt-1) | WB-STRAIN:WBStrain00047239 | WormBase (WB) | WB | unknown | 2026-09-05 04:56:13 | 0 | ||||
|
goeEx737. Resource Report Resource Website 1+ mentions |
RRID:WB-STRAIN:WBStrain00047291 | Caenorhabditis elegans | goeEx737. | goeEx737 [flp-24p::SL1::GCaMP3.35-SL2::SL2::mKate2::unc-54 3'UTR + unc-119(+)]. ALA-specific expression of GCaMP with an additional mKate marker for expression reference. Pick mKate+ to maintain. High transmission rate (>99%). Reference: Konietzka et al. 2019. Current Biology (accepted).|"Made_by: Dr. Jan Konietzka" | WB-STRAIN:WBStrain00047291 | WormBase (WB) | WB | unknown | 2026-09-05 04:56:13 | 1 | ||||||
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nxf-1(t2160) V. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00047293 | Caenorhabditis elegans | nxf-1(t2160) V. | Made_by: Angelina Zheleva, Juan Cabello, Ralf Schnabel|"Temperature-sensitive. Maintain at 15-20C. 100% embryonic lethal at 25C. Pharynx unattached (Pun) and morphogenic defects. Reference: Zheleva A, et al. PLoS Genet. 2019 Sep 16;15(9):e1008338." | WBGene00003834(nxf-1) | WBGene00003834(nxf-1) | WB-STRAIN:WBStrain00047293 | WormBase (WB) | WB | unknown | 2026-09-05 04:56:13 | 0 | ||||
|
nxf-1(t2160) V; jcpEx6. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00047294 | Caenorhabditis elegans | nxf-1(t2160) V; jcpEx6. | jcpEx6 [nxf-1p::nxf-1::3xFLAG::eGFP::nxf-1UTR]. jcpEx6 transgene rescues nxf-1(t2160) embryonic lethality at 25C. Temperature-sensitive; maintain at 25C to retain the array. nxf-1(t2160) mutants are 100% embryonic lethal at 25C. Reference: Zheleva A, et al. PLoS Genet. 2019 Sep 16;15(9):e1008338. | WBGene00003834(nxf-1) | WBGene00003834(nxf-1) | WB-STRAIN:WBStrain00047294 | WormBase (WB) | WB | unknown | PMID:37254647 | 2026-09-05 04:56:13 | 0 | |||
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pat-3(st564) III; mwEx32. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00047295 | Caenorhabditis elegans | pat-3(st564) III; mwEx32. | mwEx32 [pat-3(YYFF) + sur-5::GFP]. Pick GFP+ to maintain. mwEx32 carries a mutant form of pat-3 gene with tyrosine (Y) to phenylalanine (F) mutations; rescues pat-3 null allele. Abnormal DTC migration. Reference: Lee M, et al. J Biol Chem. 2001 Sep 28;276(39):36404-10. | WBGene00003930(pat-3) | WBGene00003930(pat-3) | WB-STRAIN:WBStrain00047295 | WormBase (WB) | WB | unknown | 2026-09-05 04:56:13 | 0 | ||||
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pat-3(st564) III; mwEx443. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00047296 | Caenorhabditis elegans | pat-3(st564) III; mwEx443. | mwEx443 [pat-3(+) + sur-5::GFP]. Pick GFP+ to maintain. mwEx443 contains wild type contains pat-3 genomic DNA, rescues pat-3 null allele. Reference: Lee M, et al. J Biol Chem. 2001 Sep 28;276(39):36404-10. | WBGene00003930(pat-3) | WBGene00003930(pat-3) | WB-STRAIN:WBStrain00047296 | WormBase (WB) | WB | unknown | 2026-09-05 04:56:13 | 0 | ||||
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puf-11(q971) IV. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00047330 | Caenorhabditis elegans | puf-11(q971) IV. | Made_by: Kim Haupt|"Superficially wild-type." | WBGene00022257(puf-11) | WBGene00022257(puf-11) | WB-STRAIN:WBStrain00047330 | WormBase (WB) | WB | unknown | 2026-09-05 04:56:14 | 0 | ||||
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fust-1(rt255) II. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00047287 | Caenorhabditis elegans | fust-1(rt255) II. | Made_by: Saba Baskoylu|"Superficially wild-type. This is the appropriate control strain for FUS disease models HA2846 and HA2847. This control strain contains presumably silent edits inserted by CRISPR editing while creating the FUS disease models in HA2846 and HA2847, and was back-crossed to remove the pha-1 allele used in strain construction. Reference: Baskoylu S, et al. bioRxiv 799932; doi: https:" | WBGene00016173(fust-1) | WBGene00016173(fust-1) | WB-STRAIN:WBStrain00047287 | WormBase (WB) | WB | unknown | 2026-09-05 04:56:13 | 0 |
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The data sets included in this resource are published in Kravitz et al, 2012. Distinct roles for direct and indirect pathway striatal neurons in reinforcement (Nat. Neurosci).
