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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
Assay Depot
 
Resource Report
Resource Website
Assay Depot (RRID:SCR_013821) software resource A web application containing access to research services and products. Users can create custom services, find research services and compare them, request price quotes, exchange files and upload reports, place orders, and track studies. Assay Depot regularly updates its page with new services. web application, assessment test provider, services is listed by: Connected Researchers
is related to: Connected Researchers
Public, Account required SCR_013821 AssayDepot 2026-09-12 12:58:10 0
Biomag Discussion Group on Yahoo
 
Resource Report
Resource Website
Biomag Discussion Group on Yahoo (RRID:SCR_014089) data or information resource, portal, topical portal THIS RESOURCE IS NO LONGER IN SERVICE, documented December 11, 2015. A discussion group for those actively involved in research into, or applications of, biomagnetism and magnetoencephalography (MEG). is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) THIS RESOURCE IS NO LONGER IN SERVICE SCR_014089 2026-09-12 12:58:12 0
Paperpile
 
Resource Report
Resource Website
1+ mentions
Paperpile (RRID:SCR_014002) software resource, web application A web application which allows users to find reference papers and cite them during the authoring process. Paperpile utilizes Google and Chrome apps in order to directly download PDFs from various databases to Google Drive. If writing in Google Docs, users can search for certain reference papers and insert them into their draft as citations using the Google Drive Paperpile tool. Users can also collaborate on papers and add different citations. software application, bibliography, authoring, reference management uses: Google Docs
is used by: Harvard University; Cambridge; United States
is used by: Massachusetts Institute of Technology; Massachusetts; USA;
is used by: University of California at Berkeley; Berkeley; USA
is used by: Duke University; North Carolina; USA
is used by: University of Cambridge; Cambridge; United Kingdom
is used by: Imperial College London; London; United Kingdom
is used by: Ecole Polytechnique Federale de Lausanne; Lausanne; Switzerland
is used by: Max-Planck-Gesellschaft
is listed by: Connected Researchers
is related to: Google Docs
is related to: Connected Researchers
Fee (for different packages) per month SCR_014002 2026-09-12 12:58:10 4
Poetica
 
Resource Report
Resource Website
Poetica (RRID:SCR_014005) software resource, web application A web-based authoring platform for Wordpress which allows users to write, edit, and track changes and revisions. Users can see all revisions and edits to an artcle and decide which ones may be kept or reverted. After creating an article, users can upload it directly to WordPress. authoring tool, revision control, Markdown is listed by: Connected Researchers
is related to: WordPress
is related to: Connected Researchers
Account required, free SCR_014005 2026-09-12 12:58:10 0
APERTURE
 
Resource Report
Resource Website
1+ mentions
APERTURE (RRID:SCR_014082) data analysis software, data processing software, software application, software resource, software toolkit, workflow software A MATLAB-based toolbox for analysis of EEG, MEG, and ECoG data. APERTURE allows flexible multivariate analysis of ERPs and oscillatory activity and supports mass-univariate analysis with advanced statistical tests. Computations are accelerated using parallel computing supported through the MATLAB distributed computing toolbox. Examination of large, high-dimensional datasets is made simple through data visualization tools, including advanced plotting routines and generation of PDF reports with many figures. matlab, software toolkit, workflow software, toolbox, multivariate analysis, data analysis uses: MATLAB
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC)
has parent organization: Vanderbilt University; Tennessee; USA
SCR_014082 Analysis of Patterns in Electrophysiological Recordings Toolbox with Utilities for REsearch 2026-09-12 12:58:12 3
WebPlotDigitizer
 
Resource Report
Resource Website
1000+ mentions
WebPlotDigitizer (RRID:SCR_013996) data access protocol, service resource, software resource, web service Web based tool to extract data from plots, images, and maps. HTML5 based online tool to extract numerical data from plot images. Used to reverse engineer images of data visualizations to extract underlying numerical data. Data extraction, plot, image, map, HTML5, numerical data extraction, plot image, reverse image, reverse data visualization is listed by: SoftCite
is related to: Connected Researchers
Free, Available for download, Freely available https://apps.automeris.io/wpd/, https://github.com/ankitrohatgi/WebPlotDigitizer, https://github.com/ankitrohatgi/WebPlotDigitizer/releases http://arohatgi.info/WebPlotDigitizer/ SCR_013996 WebPlotDigitizer Version 4.1, WebPlotDigitizer Version 4.2 2026-09-12 12:58:10 2274
Arizona State University; Arizona; USA
 
Resource Report
Resource Website
1+ mentions
Arizona State University; Arizona; USA (RRID:SCR_014053) ASU university Public research university located in Tempe, Arizona, USA. is related to: LINCS Information Framework
is parent organization of: Sparse Learning with Efficient Projections
is parent organization of: SPROUTS- Structural Prediction for Protein Folding Utility System
is parent organization of: Ask A Biologist
is parent organization of: CBioC
is parent organization of: ASU CLAS Goldwater Environmental Laboratory
is parent organization of: DNASU Core Facility
is parent organization of: NeuroML
is parent organization of: scikit-feature
is parent organization of: Ventricular Morphometry Analysis System
is parent organization of: Arizona State University Knowledge Enterprise Eyring Materials Center Core Facility
is parent organization of: Arizona State University Knowledge Enterprise Solar Fab Core Facility
is parent organization of: Arizona State University Knowledge Enterprise Desert Southwest Genomics Center Core Facility
is parent organization of: Arizona State University Knowledge Enterprise Preclinical Imaging Core Facility
is parent organization of: Arizona State University Knowledge Enterprise Advanced Electronics and Packaging Core Facility
is parent organization of: Arizona State University Knowledge Enterprise Advanced Light Microscopy Core Facility
GRID grid.215654.1, Wikidata Q670897, Crossref Funder ID 100007482, ISNI 0000 0001 2151 2636 https://ror.org/03efmqc40 SCR_014053 Arizona State University 2026-09-12 12:58:11 5
University of Kansas Medical Center; Kansas; USA
 
Resource Report
Resource Website
1+ mentions
University of Kansas Medical Center; Kansas; USA (RRID:SCR_014051) A public health center and research institution affiliated with the University Kansas. is related to: University of Kansas Medical Center Pharmacology
is related to: Clinical and Translational Science Awards Consortium
has parent organization: University of Kansas; Kansas; USA
is parent organization of: ePRISM
is parent organization of: University of Kansas Medical Center Mass Spectrometry and Proteomics Core Facility
SCR_014051 KU Medical Center, University of Kansas Medical Center 2026-09-12 12:58:11 4
KWIPPED
 
Resource Report
Resource Website
KWIPPED (RRID:SCR_014061) access service resource, service resource An online rental equipment marketplace which connects renters to instrument suppliers from various industries. Renters can rent directly from suppliers or request quotes from different suppliers. lab equipment, rentals, marketplace, instrument supplier Avaialble to the academic community, Available to industry SCR_014061 2026-09-12 12:58:11 0
Benefunder
 
Resource Report
Resource Website
Benefunder (RRID:SCR_013853) funding resource A funding resource which allows researchers to receive funding from citizen and organizational donors. Benefunder encourages relationships between the donor(s) and researcher(s) as well as wealth management which facilitates long-term funding and low overhead. funding, citizen donor, organizational donor is listed by: Connected Researchers
is related to: Connected Researchers
Available for researchers only http://benefunder.org, http://benefunder.org/institutions SCR_013853 benefunder 2026-09-12 12:58:10 0
Consano
 
Resource Report
Resource Website
Consano (RRID:SCR_013855) funding resource A non-profit funding resource that allows academic medical researchers to receive funding from donors. Researchers set a fixed amount for donor funding which must be reached within two months to ensure the continuation of the campaign. Consano allows quarterly communication between donors and researchers throughout the term of the project. Some non-academic research is approved to be funded through Consano. funding, medical research, donor is listed by: Connected Researchers
is related to: Connected Researchers
Available to the medical research community https://www.consano.org/about/how-it-works, https://www.consano.org/about/faq SCR_013855 2026-09-12 12:58:10 0
Emerald Cloud Lab
 
Resource Report
Resource Website
1+ mentions
Emerald Cloud Lab (RRID:SCR_013976) data acquisition software, data management software, data processing software, software application, software resource A production service resource which allows researchers to conduct experimental procedures through the cloud. Researchers can ship samples for an experiment to Emerald, then design the experiment(s) over the web using ECL software. Emerald then conducts the experiment(s) in an automated lab as specified, organizing the data into a database in the cloud. Samples are then shipped back to the lab (within a metter of days) and results can be analyze ECL's data analysis suite. Standard experiment types include but are not limited to: analytical balance readings, light microscopy, solid phase extraction, flourescence thermodynamics, RNA extraction/cDNA prep, and Western blot. Additional experiment types may be contributed. production service resource, automated experiment, cloud is listed by: Connected Researchers
is related to: Connected Researchers
Charge by experiment on a per sample basis with no minimum transaction size, The community can contribute to this resource SCR_013976 2026-09-12 12:58:11 3
Docollab
 
Resource Report
Resource Website
Docollab (RRID:SCR_013861) data or information resource, service resource An web-based computational hosting resource which allows users to document scientific research and collaborate with others. Users can store experiments and protocols, organize and manage projects, share and collaborate with colleagues, and publish findings within their Docollab account. computational hosting resource, ELN, electronic lab notebook, lab management, collaboration is listed by: Connected Researchers
is related to: Connected Researchers
Free, Public SCR_013861 2026-09-12 12:58:10 0
IPython Notebook
 
Resource Report
Resource Website
1+ mentions
IPython Notebook (RRID:SCR_013984) software resource, web application A web application and interactive computational environment where users can combine code execution, rich text, mathematics, plots, and rich media. IPython Notebook consists of two parts, the web application and plain texts. The Ipython Notebook web application is used for interactive authoring of literate computations, in which explanatory text, mathematics, computations, and rich media output may be combined. Input and output are stored in persistent cells that may be edited in-place. The plain text documents, called notebooks, record and distribute the results of the rich computations. Saved files in the notebook can be put under version control and shared with colleagues. web application, computational environment, interactive, Python, code is used by: Wakari
is listed by: Connected Researchers
is related to: IPython
is related to: Python Programming Language
is related to: Connected Researchers
is related to: Wakari
is related to: SciPy
Microsoft ;
Alfred P. Sloan Foundation ;
Rackspace
Free, Public SCR_013984 2026-09-12 12:58:11 8
Vanderbilt University Medical Center; Tennessee; USA
 
Resource Report
Resource Website
1+ mentions
Vanderbilt University Medical Center; Tennessee; USA (RRID:SCR_014046) A public health center and research institution affiliated with Vanderbilt University. is related to: Vanderbilt Clinical Research Center
is related to: Cooperative Human Tissue Network Western Division at Vanderbilt University Medical Center
has parent organization: Vanderbilt University; Tennessee; USA
is parent organization of: Vanderbilt University Medical Center Pharmacology
is parent organization of: Vanderbilt Digestive Disease Research Center
is parent organization of: Vanderbilt Digestive Disease Research Center Bioanalytical Mass Spectrometry and Proteomics Core
is parent organization of: Vanderbilt Center for Diabetes Translation Research Administrative Core
is parent organization of: Vanderbilt Center for Diabetes Translation Research Behavioral Intervention Technologies and Services Core
is parent organization of: Vanderbilt Center for Diabetes Translation Research Community Outreach and Heath Disparities Core
is parent organization of: Vanderbilt Center for Diabetes Translation Research Community Engagement Core
is parent organization of: Vanderbilt Center for Diabetes Translation Research
is parent organization of: Vanderbilt Center for Diabetes Translation Research Translation Methods Core
is parent organization of: Vanderbilt Digestive Disease Research Center Flow Cytometry Core
is parent organization of: Vanderbilt Digestive Disease Research Center Cellular Imaging Core
SCR_014046 VU Medical Center, Vanderbilt University Medical Center 2026-09-12 12:58:11 2
Cytobank
 
Resource Report
Resource Website
1000+ mentions
Cytobank (RRID:SCR_014043) service resource, software resource, training service resource, web application A cloud-based platform which allows users to analyze, visualize, and archive multiparamter cytometry data for single-cell biology. Multiple single-cell data sets can be analyzed and visualized simultaneously with a variety of graphics, inlcuding Sunburst, SPADE, and viSNE. Users can store and back up related data such as protocols, microscopy images, and presentations and collaborate and share analysis and data sets with other Cytobank users. Cytobank also provides a variety of services and training sessions to assist with experiment workflow. single-cell biology, data, platform, cytometry, analyze, visualize, graphic, training service is related to: FLOWRepository
is related to: FLOWRepository
Free, Price varies for different options, Available to the research community, Available to industry SCR_014043 Cytobank Inc. 2026-09-12 12:58:11 1326
BioPSE
 
Resource Report
Resource Website
BioPSE (RRID:SCR_014044) simulation software, software application, software resource A simulation software package which hosts a collection of algorithms used to run bioelectric field simulations inside of SCIRun. The software provided in the package may be used for geometric modeling, simulation, and visualization for solving bioelectric field problems. software, algorithm, simulation, modeling, visaulization, bioelectric field, tool is related to: SCIRun
is related to: SCIRun
has parent organization: University of Utah; Utah; USA
NIH Public SCR_014044 SCIRun/BioPSE 2026-09-12 12:58:11 0
StatCrunch
 
Resource Report
Resource Website
10+ mentions
StatCrunch (RRID:SCR_013992) data or information resource, software resource, web application A web application which allows users to collect data, perform complex analyses, and generate results. Users can upload data sets from their computer or from the internet for data analysis and graph creation which can be saved, printed, and downloaded. More than 15,000 statistical data sets are available. web application, statistics, data analysis, data set, graph is listed by: Connected Researchers
is related to: Connected Researchers
The community can contribute to this resource SCR_013992 2026-09-12 12:58:11 13
Wakari
 
Resource Report
Resource Website
1+ mentions
Wakari (RRID:SCR_013995) software resource, web application A web application which performs Python data analysis. Users can create IPython notebooks to hold uploaded data and use various tools to describe, analyze, and visualize the data. Notebooks, data, and Anaconda environments can be shared as "bundles" with other users, who can edit and download them. web application, data analysis, Python data analysis, visualization uses: IPython Notebook
is listed by: Connected Researchers
is related to: Connected Researchers
is related to: IPython Notebook
Free, Fee (for different packages) SCR_013995 2026-09-12 12:58:10 1
McGill University Health Centre; Quebec; Canada
 
Resource Report
Resource Website
1+ mentions
McGill University Health Centre; Quebec; Canada (RRID:SCR_014048) MUHC A public health center and research institution affiliated with McGill University. is related to: Cancer Research Network of the FRSQ
has parent organization: McGill University; Montreal; Canada
Public SCR_014048 McGill University Health Centre 2026-09-12 12:58:11 3

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