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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Assay Depot Resource Report Resource Website |
Assay Depot (RRID:SCR_013821) | software resource | A web application containing access to research services and products. Users can create custom services, find research services and compare them, request price quotes, exchange files and upload reports, place orders, and track studies. Assay Depot regularly updates its page with new services. | web application, assessment test provider, services |
is listed by: Connected Researchers is related to: Connected Researchers |
Public, Account required | SCR_013821 | AssayDepot | 2026-09-12 12:58:10 | 0 | |||||||||
|
Biomag Discussion Group on Yahoo Resource Report Resource Website |
Biomag Discussion Group on Yahoo (RRID:SCR_014089) | data or information resource, portal, topical portal | THIS RESOURCE IS NO LONGER IN SERVICE, documented December 11, 2015. A discussion group for those actively involved in research into, or applications of, biomagnetism and magnetoencephalography (MEG). | is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) | THIS RESOURCE IS NO LONGER IN SERVICE | SCR_014089 | 2026-09-12 12:58:12 | 0 | |||||||||||
|
Paperpile Resource Report Resource Website 1+ mentions |
Paperpile (RRID:SCR_014002) | software resource, web application | A web application which allows users to find reference papers and cite them during the authoring process. Paperpile utilizes Google and Chrome apps in order to directly download PDFs from various databases to Google Drive. If writing in Google Docs, users can search for certain reference papers and insert them into their draft as citations using the Google Drive Paperpile tool. Users can also collaborate on papers and add different citations. | software application, bibliography, authoring, reference management |
uses: Google Docs is used by: Harvard University; Cambridge; United States is used by: Massachusetts Institute of Technology; Massachusetts; USA; is used by: University of California at Berkeley; Berkeley; USA is used by: Duke University; North Carolina; USA is used by: University of Cambridge; Cambridge; United Kingdom is used by: Imperial College London; London; United Kingdom is used by: Ecole Polytechnique Federale de Lausanne; Lausanne; Switzerland is used by: Max-Planck-Gesellschaft is listed by: Connected Researchers is related to: Google Docs is related to: Connected Researchers |
Fee (for different packages) per month | SCR_014002 | 2026-09-12 12:58:10 | 4 | ||||||||||
|
Poetica Resource Report Resource Website |
Poetica (RRID:SCR_014005) | software resource, web application | A web-based authoring platform for Wordpress which allows users to write, edit, and track changes and revisions. Users can see all revisions and edits to an artcle and decide which ones may be kept or reverted. After creating an article, users can upload it directly to WordPress. | authoring tool, revision control, Markdown |
is listed by: Connected Researchers is related to: WordPress is related to: Connected Researchers |
Account required, free | SCR_014005 | 2026-09-12 12:58:10 | 0 | ||||||||||
|
APERTURE Resource Report Resource Website 1+ mentions |
APERTURE (RRID:SCR_014082) | data analysis software, data processing software, software application, software resource, software toolkit, workflow software | A MATLAB-based toolbox for analysis of EEG, MEG, and ECoG data. APERTURE allows flexible multivariate analysis of ERPs and oscillatory activity and supports mass-univariate analysis with advanced statistical tests. Computations are accelerated using parallel computing supported through the MATLAB distributed computing toolbox. Examination of large, high-dimensional datasets is made simple through data visualization tools, including advanced plotting routines and generation of PDF reports with many figures. | matlab, software toolkit, workflow software, toolbox, multivariate analysis, data analysis |
uses: MATLAB is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: Vanderbilt University; Tennessee; USA |
SCR_014082 | Analysis of Patterns in Electrophysiological Recordings Toolbox with Utilities for REsearch | 2026-09-12 12:58:12 | 3 | ||||||||||
|
WebPlotDigitizer Resource Report Resource Website 1000+ mentions |
WebPlotDigitizer (RRID:SCR_013996) | data access protocol, service resource, software resource, web service | Web based tool to extract data from plots, images, and maps. HTML5 based online tool to extract numerical data from plot images. Used to reverse engineer images of data visualizations to extract underlying numerical data. | Data extraction, plot, image, map, HTML5, numerical data extraction, plot image, reverse image, reverse data visualization |
is listed by: SoftCite is related to: Connected Researchers |
Free, Available for download, Freely available | https://apps.automeris.io/wpd/, https://github.com/ankitrohatgi/WebPlotDigitizer, https://github.com/ankitrohatgi/WebPlotDigitizer/releases | http://arohatgi.info/WebPlotDigitizer/ | SCR_013996 | WebPlotDigitizer Version 4.1, WebPlotDigitizer Version 4.2 | 2026-09-12 12:58:10 | 2274 | |||||||
|
Arizona State University; Arizona; USA Resource Report Resource Website 1+ mentions |
Arizona State University; Arizona; USA (RRID:SCR_014053) | ASU | university | Public research university located in Tempe, Arizona, USA. |
is related to: LINCS Information Framework is parent organization of: Sparse Learning with Efficient Projections is parent organization of: SPROUTS- Structural Prediction for Protein Folding Utility System is parent organization of: Ask A Biologist is parent organization of: CBioC is parent organization of: ASU CLAS Goldwater Environmental Laboratory is parent organization of: DNASU Core Facility is parent organization of: NeuroML is parent organization of: scikit-feature is parent organization of: Ventricular Morphometry Analysis System is parent organization of: Arizona State University Knowledge Enterprise Eyring Materials Center Core Facility is parent organization of: Arizona State University Knowledge Enterprise Solar Fab Core Facility is parent organization of: Arizona State University Knowledge Enterprise Desert Southwest Genomics Center Core Facility is parent organization of: Arizona State University Knowledge Enterprise Preclinical Imaging Core Facility is parent organization of: Arizona State University Knowledge Enterprise Advanced Electronics and Packaging Core Facility is parent organization of: Arizona State University Knowledge Enterprise Advanced Light Microscopy Core Facility |
GRID grid.215654.1, Wikidata Q670897, Crossref Funder ID 100007482, ISNI 0000 0001 2151 2636 | https://ror.org/03efmqc40 | SCR_014053 | Arizona State University | 2026-09-12 12:58:11 | 5 | ||||||||
|
University of Kansas Medical Center; Kansas; USA Resource Report Resource Website 1+ mentions |
University of Kansas Medical Center; Kansas; USA (RRID:SCR_014051) | A public health center and research institution affiliated with the University Kansas. |
is related to: University of Kansas Medical Center Pharmacology is related to: Clinical and Translational Science Awards Consortium has parent organization: University of Kansas; Kansas; USA is parent organization of: ePRISM is parent organization of: University of Kansas Medical Center Mass Spectrometry and Proteomics Core Facility |
SCR_014051 | KU Medical Center, University of Kansas Medical Center | 2026-09-12 12:58:11 | 4 | ||||||||||||
|
KWIPPED Resource Report Resource Website |
KWIPPED (RRID:SCR_014061) | access service resource, service resource | An online rental equipment marketplace which connects renters to instrument suppliers from various industries. Renters can rent directly from suppliers or request quotes from different suppliers. | lab equipment, rentals, marketplace, instrument supplier | Avaialble to the academic community, Available to industry | SCR_014061 | 2026-09-12 12:58:11 | 0 | |||||||||||
|
Benefunder Resource Report Resource Website |
Benefunder (RRID:SCR_013853) | funding resource | A funding resource which allows researchers to receive funding from citizen and organizational donors. Benefunder encourages relationships between the donor(s) and researcher(s) as well as wealth management which facilitates long-term funding and low overhead. | funding, citizen donor, organizational donor |
is listed by: Connected Researchers is related to: Connected Researchers |
Available for researchers only | http://benefunder.org, http://benefunder.org/institutions | SCR_013853 | benefunder | 2026-09-12 12:58:10 | 0 | ||||||||
|
Consano Resource Report Resource Website |
Consano (RRID:SCR_013855) | funding resource | A non-profit funding resource that allows academic medical researchers to receive funding from donors. Researchers set a fixed amount for donor funding which must be reached within two months to ensure the continuation of the campaign. Consano allows quarterly communication between donors and researchers throughout the term of the project. Some non-academic research is approved to be funded through Consano. | funding, medical research, donor |
is listed by: Connected Researchers is related to: Connected Researchers |
Available to the medical research community | https://www.consano.org/about/how-it-works, https://www.consano.org/about/faq | SCR_013855 | 2026-09-12 12:58:10 | 0 | |||||||||
|
Emerald Cloud Lab Resource Report Resource Website 1+ mentions |
Emerald Cloud Lab (RRID:SCR_013976) | data acquisition software, data management software, data processing software, software application, software resource | A production service resource which allows researchers to conduct experimental procedures through the cloud. Researchers can ship samples for an experiment to Emerald, then design the experiment(s) over the web using ECL software. Emerald then conducts the experiment(s) in an automated lab as specified, organizing the data into a database in the cloud. Samples are then shipped back to the lab (within a metter of days) and results can be analyze ECL's data analysis suite. Standard experiment types include but are not limited to: analytical balance readings, light microscopy, solid phase extraction, flourescence thermodynamics, RNA extraction/cDNA prep, and Western blot. Additional experiment types may be contributed. | production service resource, automated experiment, cloud |
is listed by: Connected Researchers is related to: Connected Researchers |
Charge by experiment on a per sample basis with no minimum transaction size, The community can contribute to this resource | SCR_013976 | 2026-09-12 12:58:11 | 3 | ||||||||||
|
Docollab Resource Report Resource Website |
Docollab (RRID:SCR_013861) | data or information resource, service resource | An web-based computational hosting resource which allows users to document scientific research and collaborate with others. Users can store experiments and protocols, organize and manage projects, share and collaborate with colleagues, and publish findings within their Docollab account. | computational hosting resource, ELN, electronic lab notebook, lab management, collaboration |
is listed by: Connected Researchers is related to: Connected Researchers |
Free, Public | SCR_013861 | 2026-09-12 12:58:10 | 0 | ||||||||||
|
IPython Notebook Resource Report Resource Website 1+ mentions |
IPython Notebook (RRID:SCR_013984) | software resource, web application | A web application and interactive computational environment where users can combine code execution, rich text, mathematics, plots, and rich media. IPython Notebook consists of two parts, the web application and plain texts. The Ipython Notebook web application is used for interactive authoring of literate computations, in which explanatory text, mathematics, computations, and rich media output may be combined. Input and output are stored in persistent cells that may be edited in-place. The plain text documents, called notebooks, record and distribute the results of the rich computations. Saved files in the notebook can be put under version control and shared with colleagues. | web application, computational environment, interactive, Python, code |
is used by: Wakari is listed by: Connected Researchers is related to: IPython is related to: Python Programming Language is related to: Connected Researchers is related to: Wakari is related to: SciPy |
Microsoft ; Alfred P. Sloan Foundation ; Rackspace |
Free, Public | SCR_013984 | 2026-09-12 12:58:11 | 8 | |||||||||
|
Vanderbilt University Medical Center; Tennessee; USA Resource Report Resource Website 1+ mentions |
Vanderbilt University Medical Center; Tennessee; USA (RRID:SCR_014046) | A public health center and research institution affiliated with Vanderbilt University. |
is related to: Vanderbilt Clinical Research Center is related to: Cooperative Human Tissue Network Western Division at Vanderbilt University Medical Center has parent organization: Vanderbilt University; Tennessee; USA is parent organization of: Vanderbilt University Medical Center Pharmacology is parent organization of: Vanderbilt Digestive Disease Research Center is parent organization of: Vanderbilt Digestive Disease Research Center Bioanalytical Mass Spectrometry and Proteomics Core is parent organization of: Vanderbilt Center for Diabetes Translation Research Administrative Core is parent organization of: Vanderbilt Center for Diabetes Translation Research Behavioral Intervention Technologies and Services Core is parent organization of: Vanderbilt Center for Diabetes Translation Research Community Outreach and Heath Disparities Core is parent organization of: Vanderbilt Center for Diabetes Translation Research Community Engagement Core is parent organization of: Vanderbilt Center for Diabetes Translation Research is parent organization of: Vanderbilt Center for Diabetes Translation Research Translation Methods Core is parent organization of: Vanderbilt Digestive Disease Research Center Flow Cytometry Core is parent organization of: Vanderbilt Digestive Disease Research Center Cellular Imaging Core |
SCR_014046 | VU Medical Center, Vanderbilt University Medical Center | 2026-09-12 12:58:11 | 2 | ||||||||||||
|
Cytobank Resource Report Resource Website 1000+ mentions |
Cytobank (RRID:SCR_014043) | service resource, software resource, training service resource, web application | A cloud-based platform which allows users to analyze, visualize, and archive multiparamter cytometry data for single-cell biology. Multiple single-cell data sets can be analyzed and visualized simultaneously with a variety of graphics, inlcuding Sunburst, SPADE, and viSNE. Users can store and back up related data such as protocols, microscopy images, and presentations and collaborate and share analysis and data sets with other Cytobank users. Cytobank also provides a variety of services and training sessions to assist with experiment workflow. | single-cell biology, data, platform, cytometry, analyze, visualize, graphic, training service |
is related to: FLOWRepository is related to: FLOWRepository |
Free, Price varies for different options, Available to the research community, Available to industry | SCR_014043 | Cytobank Inc. | 2026-09-12 12:58:11 | 1326 | |||||||||
|
BioPSE Resource Report Resource Website |
BioPSE (RRID:SCR_014044) | simulation software, software application, software resource | A simulation software package which hosts a collection of algorithms used to run bioelectric field simulations inside of SCIRun. The software provided in the package may be used for geometric modeling, simulation, and visualization for solving bioelectric field problems. | software, algorithm, simulation, modeling, visaulization, bioelectric field, tool |
is related to: SCIRun is related to: SCIRun has parent organization: University of Utah; Utah; USA |
NIH | Public | SCR_014044 | SCIRun/BioPSE | 2026-09-12 12:58:11 | 0 | ||||||||
|
StatCrunch Resource Report Resource Website 10+ mentions |
StatCrunch (RRID:SCR_013992) | data or information resource, software resource, web application | A web application which allows users to collect data, perform complex analyses, and generate results. Users can upload data sets from their computer or from the internet for data analysis and graph creation which can be saved, printed, and downloaded. More than 15,000 statistical data sets are available. | web application, statistics, data analysis, data set, graph |
is listed by: Connected Researchers is related to: Connected Researchers |
The community can contribute to this resource | SCR_013992 | 2026-09-12 12:58:11 | 13 | ||||||||||
|
Wakari Resource Report Resource Website 1+ mentions |
Wakari (RRID:SCR_013995) | software resource, web application | A web application which performs Python data analysis. Users can create IPython notebooks to hold uploaded data and use various tools to describe, analyze, and visualize the data. Notebooks, data, and Anaconda environments can be shared as "bundles" with other users, who can edit and download them. | web application, data analysis, Python data analysis, visualization |
uses: IPython Notebook is listed by: Connected Researchers is related to: Connected Researchers is related to: IPython Notebook |
Free, Fee (for different packages) | SCR_013995 | 2026-09-12 12:58:10 | 1 | ||||||||||
|
McGill University Health Centre; Quebec; Canada Resource Report Resource Website 1+ mentions |
McGill University Health Centre; Quebec; Canada (RRID:SCR_014048) | MUHC | A public health center and research institution affiliated with McGill University. |
is related to: Cancer Research Network of the FRSQ has parent organization: McGill University; Montreal; Canada |
Public | SCR_014048 | McGill University Health Centre | 2026-09-12 12:58:11 | 3 |
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