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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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European large-scale functional genomics in the rat for translational research (EURATRANS) Resource Report Resource Website 1+ mentions |
European large-scale functional genomics in the rat for translational research (EURATRANS) (RRID:SCR_013697) | EURATRANS | consortium, data or information resource, organization portal, portal | The European large-scale functional genomics in the rat for translational research (EURATRANS) consortium brings together investigators who will use next-generation sequencing technologies to generate genomic, transcriptomic and epigenomic datasets. The goal is to create quantitative metabonomic and proteomic datasets to give significant depth of coverage, at multiple levels, across pathophysiological phenotypes. The aim is to enable insights into disease mechanisms, through an integrative, cross-disciplinary approach to understanding large-scale functional genomic datasets in rats and humans. | government, individual consortium, basic science, tool development, biomarker research, data-sharing enabler, genomic, transcriptomic, epigenomic, rat, | European Union FP7 n HEALTH-F4-2010-241504 | SCR_013697 | 2026-09-12 12:58:07 | 1 | ||||||||||
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Article of the Future Resource Report Resource Website |
Article of the Future (RRID:SCR_013812) | software resource, web application | A web application which provides interactive and in depth reading of online scientific articles published in Elsevier. While reading an article, users can access interactive data sources such as Protein Viewer and Google Maps as well as links to references and databases. Prototypes for seven different scientific areas are currently available for more specific research, but all scientific disciplines are represented within Article of the Future. | web application, research, article, tool, interactive |
is listed by: Connected Researchers is related to: Elsevier is related to: Elsevier is related to: Collage Authoring Environment is related to: Connected Researchers has parent organization: Elsevier |
Free, Public | SCR_013812 | Elsevier - Article of the Future | 2026-09-12 12:58:09 | 0 | |||||||||
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SciCurve Resource Report Resource Website 1+ mentions |
SciCurve (RRID:SCR_013778) | software resource | A software application that provides visual representations and organization for systematic literature searches. Users can observe trends in scientific literature through graphic visualizations while using keyword searches to find related articles or compare trends within a given graphic. SciCurve also allows users to locate journals which publish literature in users' fields of interest. | software application, visual, systematic literature search, graphic visualization |
is listed by: Connected Researchers is related to: Connected Researchers |
Free, Public | SCR_013778 | 2026-09-12 12:58:09 | 1 | ||||||||||
|
Elsevier Resource Report Resource Website 100+ mentions |
Elsevier (RRID:SCR_013811) | information resource | A publishing company which aims to produce intellectual content as well as research platforms and intelligence solutions. Elsevier publishes works related to science, health, and technology in physical copies and online. The company also provides integrated technology and analytics which allows users to to interact with, manipulate, share, and extract informant from various resources. | publisher, publishing company, science, health, technology |
is related to: Article of the Future is related to: Article of the Future is parent organization of: Article of the Future is parent organization of: Collage Authoring Environment |
Public | SCR_013811 | Elsevier B.V., Elsevier BV | 2026-09-12 12:58:09 | 316 | |||||||||
|
Zotero Resource Report Resource Website 1000+ mentions |
Zotero (RRID:SCR_013784) | software resource | A software application that allows users to add and store research content directly from the web. Users can use the tool to add research content and bibliographic references directly to their Zotero library from their browser. The application stores PDFs, images, audio and video files, and snapshots of web pages on a single searchable interface. | software application, scientific literature, browser |
uses: Citation Style Language is listed by: Connected Researchers is related to: Connected Researchers is related to: Overleaf has parent organization: George Mason University; Virginia; USA |
Andrew W. Mellon Foundation ; Institute of Museum and Library Services ; Alfred P. Sloan Foundation |
Free, Public | SCR_013784 | 2026-09-12 12:58:09 | 1113 | |||||||||
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ACS ChemWorx Resource Report Resource Website |
ACS ChemWorx (RRID:SCR_013785) | software resource | A web application which provides tools to share references and generate bibliographies with colleagues, organize and access references, and track metrics for ACS articles. Articles are automatically synced to user libraries and are accessible from multiple devices. | web application, ACS, collaboration, references, bibliographies, library, articles |
uses: Colwiz is listed by: Connected Researchers is related to: Connected Researchers |
Free, Public | SCR_013785 | 2026-09-12 12:58:09 | 0 | ||||||||||
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Glycomics by High-throughput Integrated Technologies (GLYCOHIT) Resource Report Resource Website |
Glycomics by High-throughput Integrated Technologies (GLYCOHIT) (RRID:SCR_013708) | consortium, data or information resource, organization portal, portal | The Glycomics by High-throughput Integrated Technologies (GlycoHIT) consortium aims to advance the development of reliable and fast diagnostic tests for the early detection of cancer. By creating high-throughput technologies to analyze altered sugars, or glycobiomarkers, the consortium aims to allow scientists to diagnose different forms of cancer from a simple blood test without the need for biopsy. GlycoHIT will also further develop sugar testing technologies to allow this rapid form of diagnosis to be used in a clinical setting. | basic science, biomarker research, glycomics, cancer, glycobiomarkers, | European Union FP7 260600 | SCR_013708 | GLYCOHIT | 2026-09-12 12:58:07 | 0 | ||||||||||
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Global Research in Paediatrics (GRIP) Resource Report Resource Website 1+ mentions |
Global Research in Paediatrics (GRIP) (RRID:SCR_013707) | GRIP | consortium, data or information resource, organization portal, portal | The Global Research in Paediatrics (GRiP) consortium focuses on the lack of appropriate testing of pediatric drugs. In particular, most pediatric medications having inadequate information about dosing regimen, dose adjustment and administration. GRiP partners are working to build and maintain an infrastructure matrix, which has the core aim of reducing the current fragmentation of the efforts to study and develop the use of medicine in children. By linking the existing pediatric research networks, GRIP will involve more than 1000 institutions worldwide. | drug development, basic research, pediatrics, paediatrics, research networks | European Union FP7-HEALTH | SCR_013707 | 2026-09-12 12:58:07 | 9 | ||||||||||
|
RefSeqGene Resource Report Resource Website 50+ mentions |
RefSeqGene (RRID:SCR_013787) | information resource | A data set of defined genomic sequences used as reference standards for well-characterized genes. These standard nucleotide sequences serve as foundations for locating mutations, establishing conventions for numbering exons and introns, and defining the coordinates of other variations. Sequences are aligned to reference chromosomes. RefSeqGene is a subset of NCBI RefSeq. | data set, genomic sequences, reference standard |
is related to: RefSeq is related to: RefSeq is related to: RefSeq non-redundant proteins |
PMID:18927115 | Free, Public | SCR_013787 | NCBI RefSeqGene, RefSeqGene Project | 2026-09-12 12:58:09 | 56 | ||||||||
|
Fatty Liver Inhibition of Progression (FLIP) Resource Report Resource Website 1+ mentions |
Fatty Liver Inhibition of Progression (FLIP) (RRID:SCR_013702) | FLIP | consortium, data or information resource, organization portal, portal | The Fatty Liver: Inhibition of Progression consortium (FLIP) aims to study the mechanisms of progression of liver disease in NAFLD to provide strategies for prevention and therapy. The project is based on the largest European cohort of patients with histologically diagnosed NAFLD, assembled with clinical and epidemiological data, and with biobanks of DNA, frozen liver tissue and serum. The consortium''s efforts span all the steps of the disease for studying cellular mechanisms of progression, with a goal of answering key issues dealing with the interplay of metabolic, inflammatory and fibrotic factors in the initiation and perpetuation of liver injury. | basic science, basic research, data-sharing enabler, liver, NAFLD, | European Union FP7 | SCR_013702 | 2026-09-12 12:58:07 | 3 | ||||||||||
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NCBI Viral Genomes Resource Report Resource Website 10+ mentions |
NCBI Viral Genomes (RRID:SCR_013789) | information resource | A database which provides viral and viroid genome sequence data and resource tools. Al viral genomes are downloadable and a complete RefSeq release of viral and viroid genome sequences are available. | database, viral genome sequence, viroid genome sequence | is related to: NCBI | Free, Public | SCR_013789 | Viral Genomes | 2026-09-12 12:58:09 | 49 | |||||||||
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Genetic Association Information Network (GAIN) Resource Report Resource Website 1+ mentions |
Genetic Association Information Network (GAIN) (RRID:SCR_013703) | GAIN | consortium, data or information resource, organization portal, portal | The Genetic Association Information Network (GAIN) supports a series of Genome-Wide Association Studies (GWAS) designed to identify specific points of DNA variation associated with the occurrence of a particular common disease. Initially focusing on six major common diseases, GAIN focused on combining the results with clinical data to create a significant new resource for genetic researchers. | tool development, biomarker research, data-sharing enabler, genome, genome wide association studies, FNIH, | has parent organization: Foundation for the National Institutes of Health | Pfizer Inc ; Affymetrix Inc |
SCR_013703 | 2026-09-12 12:58:07 | 9 | |||||||||
|
NeuroML Database Resource Report Resource Website 1+ mentions |
NeuroML Database (RRID:SCR_013705) | The NeuroML database is a curated relational database that provides for the storage and retrieval of computational neuroscience models expressed in NeuroML, which is an extensible XML-based language for describing complex mathematical models of neurons and neuronal networks. NeuroML models are unique in their modular and multi-scale structure, where subcomponents of models can correspond to neuroscience models. In particular, the NeuroML database allows for efficient searches over the components of models and metadata that are associated with a hierarchical NeuroML model description. | cell, network, neuron, model, neuronal cell, network model | SCR_013705 | 2026-09-12 12:58:07 | 4 | |||||||||||||
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Clone DB Resource Report Resource Website 1+ mentions |
Clone DB (RRID:SCR_013791) | information resource | A database which integrates information about genomic clones and libraries, including sequence data, map positions and distributor information. A clone's standardized name in Clone DB is comprised of its microtiter plate address with plate number row and column, prefixed by the standard library abbreviation, to provide a unique clone name. Libraries with records may be accessed via the genomic or cell-based library browsers. | database, clone, eukaryotic organism, genomic clone, cell-based clone, cDNA | is related to: NCBI | Free, Public | SCR_013791 | NCBI Clone DB | 2026-09-12 12:58:09 | 4 | |||||||||
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Biospecimen Repository and Processing Core Resource Report Resource Website |
Biospecimen Repository and Processing Core (RRID:SCR_013792) | BRPC | information resource | A biomaterial supply and access service resource which provides a shared resource for coordinated tissue processing and biorepository services. Services include patient identification and informed consent, specimen collection, processing and banking, and annotation of banked specimens and specimen distribution. They provide biospecimen inventory management, services, and equipment. It is a shared resource of Duke University. | repository, biomaterial supply resource, shared resource, Duke University, biospecimen, tissue, tissue processing, informed consent, biobank |
is related to: Duke Cancer Institute is related to: Duke Biobank is related to: Duke University School of Medicine; North Carolina; USA has parent organization: Duke University; North Carolina; USA |
Available to the research and education community, Fee | http://www.dukecancerinstitute.org/research/shared-resources/Biospecimen%20Repository%20and%20Processing%20Core | SCR_013792 | 2026-09-12 12:58:09 | 0 | ||||||||
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National Database for Clinical Trials related to Mental Illness Resource Report Resource Website 1+ mentions |
National Database for Clinical Trials related to Mental Illness (RRID:SCR_013795) | NDCT | data resource | A database which houses human subjects clinical trial data. NDCT currently contains data on 13,409 subjects and has access to data on 100,500 subjects from the NIMH Data Archive. Users can also sign up for news updates and watch video tutorials. | database, human, clinical trial, mental health, mental illness |
uses: NIMH Data Archive uses: RDoCdb is listed by: NIH Data Sharing Repositories is related to: NIMH Data Archive is related to: RDoCdb is related to: RDoCdb |
NIH | Public, Only for research | SCR_013795 | 2026-09-12 12:58:09 | 2 | ||||||||
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Thermo Fisher: Sartorius: Ambr 15 Cell Culture Generation 2 Resource Report Resource Website 10+ mentions |
Thermo Fisher: Sartorius: Ambr 15 Cell Culture Generation 2 (RRID:SCR_013797) | instrument resource | Automated, high throughput microscale bioreactor system that replicates laboratory scale bioreactor performance., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | instrument, micro bioreactor, ambr, TAP Biosystems, Sartorius, hardware, equipment | is related to: Sartorius | THIS RESOURCE IS NO LONGER IN SERVICE | https://drive.google.com/file/d/1hBdRU27fsVkioRZb_IY_8BGPwIi_2ipq/view?usp=drivesdk | https://www.sartorius.com/download/100780/broch-ambr-15-sbi1522-e-1--data.pdf | http://www.tapbiosystems.com/a/micro-bioreactor-gp.htm | SCR_013797 | 2026-09-12 12:58:09 | 45 | |||||||
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Multi-Disciplinary Approach to the Study of Chronic Pelvic Pain Resource Report Resource Website 100+ mentions |
Multi-Disciplinary Approach to the Study of Chronic Pelvic Pain (RRID:SCR_013754) | MAPP | data or information resource, disease-related portal, portal, topical portal | Collaborative research network specializing in urological chronic pelvic pain disorders. Project involves conducting research primarily on interstitial cystitis/painful bladder syndrome and chronic prostatitis/chronic pelvic pain syndrome and involves researchers from multiple disciplines. MAPP Network includes researchers with clinical, epidemiological, and basic research expertise. | interstitial cystitis, painful bladder syndrome, chronic prostatitis, chronic pelvic pain syndrome, chronic pelvic pain |
is listed by: Collaborating for the Advancement of Interdisciplinary Research in Benign Urology is listed by: NIDDK Information Network (dkNET) is listed by: NIDDK Research Resources |
interstitial cystitis/painful bladder syndrome, IC/PBS, chronic prostatitis/chronic pelvic pain syndrome, CP/CPPS | Free, Freely available | SCR_014375 | SCR_013754 | Multidisciplinary Approach to the Study of Chronic Pelvic Pain Research Network, MAPP Research Network | 2026-09-12 12:58:08 | 189 | ||||||
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CaptoMe Resource Report Resource Website |
CaptoMe (RRID:SCR_013757) | software resource | A software application which contains a collection of biomedical resources and assist in the management resources. Resources consist of clinical trials, publications, abstracts, patents, news and events. Users can search, save, and make notes on publications. | publications, biomedical |
is listed by: Connected Researchers is related to: Connected Researchers |
Vesti Intelligence Corp. | free, public | SCR_013757 | 2026-09-12 12:58:08 | 0 | |||||||||
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ContentMine Resource Report Resource Website 1+ mentions |
ContentMine (RRID:SCR_013760) | software resource | A web application which provides public access to scientific literature through text and data mining. | web application, research, scientific literature, data mining |
is listed by: Connected Researchers is related to: Connected Researchers |
Shuttleworth Foundation | SCR_013760 | 2026-09-12 12:58:08 | 4 |
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