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Species: Synthetic
Genetic Insert: superfolder GFP
Vector Backbone Description: Backbone Marker:Philip Poole lab; Backbone Size:6393; Vector Backbone:pTn7-SCOUT11; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin and Tetracycline
Defining Citation: PMID:38715147
Comments: Ec100D pir+ genotype:
F- mcrA Δ(mrr-hsdRMS-mcrBC) ϕ80dlacZΔM15 ΔlacX74 recA1 endA1 araD139 Δ(ara, leu)7697 galU galK λ- rpsL nupG pir+(DHRF) Maintains plasmids at ~15 copies per cell.
This strain is naturally resistant to streptomycin
Proper citation: RRID:Addgene_201001 Copy
Species: Homo sapiens
Genetic Insert: AAV-Rapamycin Inducible-NFZ-Citrine with sNRP-1 terminator
Vector Backbone Description: Vector Backbone:pJT360; Vector Types:Mammalian Expression, AAV, AAV with reporter; Bacterial Resistance:Ampicillin
Defining Citation: PMID:39487265
Comments: ITRs intact . Please visit https://www.biorxiv.org/content/10.1101/2023.05.12.540558v1 for bioRxiv preprint.
Proper citation: RRID:Addgene_202061 Copy
Species: Synthetic
Genetic Insert: opt.a
Vector Backbone Description: Vector Backbone:pSTC0-zeo; Vector Types:; Bacterial Resistance:Bleocin (Zeocin)
Defining Citation: PMID:38902262
Comments: Please visit https://doi.org/10.1101/2023.05.09.539914 for bioRxiv preprint.
Proper citation: RRID:Addgene_202347 Copy
Species: Synthetic
Genetic Insert: sYFP2
Vector Backbone Description: Backbone Marker:Philip Poole lab; Backbone Size:5565; Vector Backbone:pTn7-SCOUT22; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin and Kanamycin
Defining Citation: PMID:38715147
Comments: Ec100D pir+ genotype:
F- mcrA Δ(mrr-hsdRMS-mcrBC) ϕ80dlacZΔM15 ΔlacX74 recA1 endA1 araD139 Δ(ara, leu)7697 galU galK λ- rpsL nupG pir+(DHRF) Maintains plasmids at ~15 copies per cell.
This strain is naturally resistant to streptomycin
Proper citation: RRID:Addgene_201019 Copy
Species: Synthetic
Genetic Insert: mNeonGreen
Vector Backbone Description: Vector Backbone:pPOT; Vector Types:Unspecified; Bacterial Resistance:Ampicillin
Defining Citation: PMID:40169015
Comments: Please visit https://doi.org/10.1101/2023.04.21.537815 for bioRxiv preprint.
Proper citation: RRID:Addgene_201094 Copy
Species: Homo sapiens
Genetic Insert: AAV-Rapamycin Inducible-ZF-Citrine
Vector Backbone Description: Vector Backbone:pJT360; Vector Types:Mammalian Expression, AAV, AAV with reporter; Bacterial Resistance:Ampicillin
Defining Citation: PMID:39487265
Comments: ITR deletion may be problematic for AAV . Please visit https://www.biorxiv.org/content/10.1101/2023.05.12.540558v1 for bioRxiv preprint.
Proper citation: RRID:Addgene_202062 Copy
Species: Synthetic
Genetic Insert: 70.a
Vector Backbone Description: Vector Backbone:pSTC0-zeo; Vector Types:; Bacterial Resistance:Bleocin (Zeocin)
Defining Citation: PMID:38902262
Comments: Please visit https://doi.org/10.1101/2023.05.09.539914 for bioRxiv preprint.
Proper citation: RRID:Addgene_202340 Copy
Species: Synthetic
Genetic Insert: mNeonGreen
Vector Backbone Description: Vector Backbone:pPOT; Vector Types:Unspecified; Bacterial Resistance:Ampicillin
Defining Citation: PMID:40169015
Comments: Please visit https://doi.org/10.1101/2023.04.21.537815 for bioRxiv preprint.
Proper citation: RRID:Addgene_201096 Copy
Species: Homo sapiens
Genetic Insert: AAV-Rapamycin Inducible-S3H
Vector Backbone Description: Vector Backbone:pJT360; Vector Types:Mammalian Expression, AAV, AAV with reporter; Bacterial Resistance:Ampicillin
Defining Citation: PMID:39487265
Comments: ITR deletion may be problematic for AAV . Please visit https://www.biorxiv.org/content/10.1101/2023.05.12.540558v1 for bioRxiv preprint.
Proper citation: RRID:Addgene_202066 Copy
Species: Homo sapiens
Genetic Insert: PI31
Vector Backbone Description: Vector Backbone:pRSF1b; Vector Types:Bacterial Expression; Bacterial Resistance:Kanamycin
Defining Citation: PMID:37334901
Comments: Please visit https://doi.org/10.1101/2022.11.02.514817 for bioRxiv preprint.
Proper citation: RRID:Addgene_202593 Copy
Species: Synthetic
Genetic Insert: neg. ctrl
Vector Backbone Description: Vector Backbone:pSTC0-zeo; Vector Types:; Bacterial Resistance:Bleocin (Zeocin)
Defining Citation: PMID:38902262
Comments: Please visit https://doi.org/10.1101/2023.05.09.539914 for bioRxiv preprint.
Proper citation: RRID:Addgene_202350 Copy
Species: Homo sapiens
Genetic Insert: Fbxo7
Vector Backbone Description: Vector Backbone:pGEX4T1; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:37334901
Comments: Please visit https://doi.org/10.1101/2022.11.02.514817 for bioRxiv preprint.
Proper citation: RRID:Addgene_202592 Copy
Species: Mus musculus
Genetic Insert: Tet1s-K852R
Vector Backbone Description: Backbone Size:9095; Vector Backbone:GFP-tagged construct encoding the catalitic domain of Tet1 (pc2315); Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:36056023
Proper citation: RRID:Addgene_201704 Copy
Species: Synthetic
Genetic Insert: 3xHA-NLS-en31FnCas9-T2A-EGFP
Vector Backbone Description: Backbone Size:5856; Vector Backbone:PX458; Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Ampicillin
Defining Citation: PMID:38942756
Proper citation: RRID:Addgene_201949 Copy
Species: Synthetic
Genetic Insert: 3xHA-NLS-en15FnCas9-T2A-EGFP
Vector Backbone Description: Backbone Size:4233; Vector Backbone:PX458; Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Ampicillin
Defining Citation: PMID:38942756
Proper citation: RRID:Addgene_201948 Copy
Species: Mus musculus
Genetic Insert: Tet1-ZF_CD
Vector Backbone Description: Backbone Marker:our lab; Backbone Size:5924; Vector Backbone:pCAG-mcherry-Tet1CD pc2547; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:36056023
Proper citation: RRID:Addgene_201709 Copy
Species: Synthetic
Genetic Insert: Mammalian expression plasmid of high-fidelity SpCas9 variant SpCas9-HF1 with T2A-EGFP and cloning backbone for sgRNA
Vector Backbone Description: Backbone Size:4237; Vector Backbone:PX458; Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Ampicillin
Defining Citation: PMID:38942756
Proper citation: RRID:Addgene_201952 Copy
Species: S. stipitis (yeast)
Genetic Insert: TEF1 promoter (S. stipitis)
Vector Backbone Description: Backbone Marker:Robertson; Backbone Size:2216; Vector Backbone:pAllet; Vector Types:Yeast Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:37345937
Proper citation: RRID:Addgene_202645 Copy
Species: Synthetic
Genetic Insert: Expression of en15dFnCas9-GFP in bacterial cells
Vector Backbone Description: Backbone Size:6075; Vector Backbone:pET-His6-GFP-TEV-LIC; Vector Types:Bacterial Expression, CRISPR; Bacterial Resistance:Kanamycin
Defining Citation: PMID:38942756
Proper citation: RRID:Addgene_201951 Copy
Species: Synthetic
Genetic Insert: 3xHA-NLS-dFnCas9-T2A-EGFP
Vector Backbone Description: Backbone Size:4230; Vector Backbone:PX458; Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Ampicillin
Defining Citation: PMID:38942756
Proper citation: RRID:Addgene_201954 Copy
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