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Species: Homo sapiens
Genetic Insert: CRTC2 TORC_C
Vector Backbone Description: Backbone Marker:Michael Bassik, Lacra Bintu, Addgene #161926; Vector Backbone:pJT126; Vector Types:Mammalian Expression, Lentiviral; Bacterial Resistance:Ampicillin
Defining Citation: PMID:39487265
Proper citation: RRID:Addgene_188752 Copy
Species: Homo sapiens
Genetic Insert: CACO1 Zn-C2H2_12
Vector Backbone Description: Backbone Marker:Michael Bassik, Lacra Bintu, Addgene #161926; Vector Backbone:pJT126; Vector Types:Mammalian Expression, Lentiviral; Bacterial Resistance:Ampicillin
Defining Citation: PMID:39487265
Proper citation: RRID:Addgene_188753 Copy
Species: Homo sapiens
Genetic Insert: NOTC2 Notch
Vector Backbone Description: Backbone Marker:Michael Bassik, Lacra Bintu, Addgene #161926; Vector Backbone:pJT126; Vector Types:Mammalian Expression, Lentiviral; Bacterial Resistance:Ampicillin
Defining Citation: PMID:39487265
Proper citation: RRID:Addgene_188755 Copy
Species: Other
Genetic Insert: TVA-mCherry
Vector Backbone Description: Backbone Size:3706; Vector Backbone:5xUAS Tol2; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:35866706
Comments: Please visit https://doi.org/10.1101/2021.03.25.436574 for bioRxiv preprint.
DNA construction: TVA-mCherry was amplified by PCR from a plasmid (gift from Dr. Uchida, Addgene plasmid #38044 ; http://n2t.net/addgene:38044 ; RRID:Addgene_38044) and inserted into a 5xUAS vector (Asakawa, K. et al. Genetic dissection of neural circuits by Tol2 transposon-mediated Gal4 gene and enhancer trapping in zebrafish. Proc. Natl. Acad. Sci. U. S. A. 105, 1255–1260 (2008).).
Used to create transgenic Zebrafish and make use of the Gal4/UAS system.
Note: Addgene's NGS results identified several discrepancies with the depositor's in silico generated reference sequences. The depositing lab has confirmed the discrepancies and confirmed that the plasmid functions described in the associated publication.
Proper citation: RRID:Addgene_187823 Copy
Species: Synthetic
Genetic Insert: mApple
Vector Backbone Description: Backbone Marker:Addgene #78548; Backbone Size:13014; Vector Backbone:pLentiCas9-T2A-GFP; Vector Types:Mammalian Expression, Lentiviral; Bacterial Resistance:Ampicillin
Defining Citation: PMID:38915758
Comments: Please visit https://doi.org/10.1101/2023.04.03.535384 for bioRxiv preprint.
Proper citation: RRID:Addgene_193780 Copy
Species: E. coli
Genetic Insert: VP64
Vector Backbone Description: Backbone Marker:Michael Bassik, Lacra Bintu, Addgene #161926; Vector Backbone:pJT126; Vector Types:Mammalian Expression, Lentiviral; Bacterial Resistance:Ampicillin
Defining Citation: PMID:39487265
Proper citation: RRID:Addgene_188758 Copy
Species: Homo sapiens
Genetic Insert: ZNF473 KRAB
Vector Backbone Description: Backbone Marker:Michael Bassik, Lacra Bintu, Addgene #161926; Vector Backbone:pJT126; Vector Types:Mammalian Expression, Lentiviral; Bacterial Resistance:Ampicillin
Defining Citation: PMID:39487265
Proper citation: RRID:Addgene_188759 Copy
Species: Caenorhabditis elegans
Genetic Insert: TeTx
Vector Backbone Description: Backbone Marker:stratagene; Backbone Size:8087; Vector Backbone:pBSK; Vector Types:Worm Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:38598630
Comments: Please visit for https://www.biorxiv.org/content/10.1101/2021.09.21.461278v4 bioRxiv preprint.
Proper citation: RRID:Addgene_200255 Copy
Species: Caenorhabditis elegans
Genetic Insert: TeTx
Vector Backbone Description: Backbone Marker:stratagene; Backbone Size:7047; Vector Backbone:pBSK; Vector Types:Worm Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:38598630
Comments: Please visit for https://www.biorxiv.org/content/10.1101/2021.09.21.461278v4 bioRxiv preprint.
Proper citation: RRID:Addgene_200256 Copy
Species: Sars-CoV-2
Genetic Insert: S_Q52R
Vector Backbone Description: Vector Backbone:MAC-tag-C (#108077); Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Comments: Please visit https://doi.org/10.21203/rs.3.rs-4322477/v1 for preprint.
Proper citation: RRID:Addgene_194847 Copy
Species: Sars-CoV-2
Genetic Insert: S_L18F
Vector Backbone Description: Vector Backbone:MAC-tag-C (#108077); Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Comments: Please visit https://doi.org/10.21203/rs.3.rs-4322477/v1 for preprint.
Proper citation: RRID:Addgene_194840 Copy
Species: Caenorhabditis elegans
Genetic Insert: GCaMP6
Vector Backbone Description: Backbone Marker:stratagene; Backbone Size:6293; Vector Backbone:pBSK; Vector Types:Worm Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:38598630
Comments: Please visit for https://www.biorxiv.org/content/10.1101/2021.09.21.461278v4 bioRxiv preprint.
Please note: This plasmid contains a 62 bp deletion in unc-54 3' UTR. This deletion is not known to affect plasmid function.
Proper citation: RRID:Addgene_200779 Copy
Species: Sars-CoV-2
Genetic Insert: S_S982A
Vector Backbone Description: Vector Backbone:MAC-tag-C (#108077); Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Comments: Please visit https://doi.org/10.21203/rs.3.rs-4322477/v1 for preprint.
Proper citation: RRID:Addgene_194849 Copy
Species: Caenorhabditis elegans
Genetic Insert: miniSOG
Vector Backbone Description: Backbone Size:7996; Vector Backbone:pBSK; Vector Types:Worm Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:38598630
Comments: Please visit https://www.biorxiv.org/content/10.1101/2021.09.21.461278v4 for bioRxiv preprint.
Proper citation: RRID:Addgene_199693 Copy
Species: Danio rerio
Genetic Insert: Zebrafish fabp10a promoter:Cre recombinase (Cre) fused to a mutant estrogen ligand-binding domain (ERT2), polyA
Vector Backbone Description: Vector Backbone:Unknown; Vector Types:Zebrafish transgenesis; Bacterial Resistance:Ampicillin
Defining Citation: PMID:31575545
Comments: Note there is mcherry sequence downstream of fabp10a promoter, but it does not produce a functional (fluorescent) protein.
Proper citation: RRID:Addgene_198242 Copy
Species: Caenorhabditis elegans
Genetic Insert: ins-22
Vector Backbone Description: Backbone Marker:stratagene; Backbone Size:8224; Vector Backbone:pBSK; Vector Types:Worm Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:38598630
Comments: Please visit for https://www.biorxiv.org/content/10.1101/2021.09.21.461278v4 bioRxiv preprint.
Proper citation: RRID:Addgene_200783 Copy
Species: Homo sapiens
Genetic Insert: Lenti pEF-dEnAsCas12a-NLS-VPR-3XHA-T2A-BSD
Vector Backbone Description: Vector Backbone:pAR010; Vector Types:Mammalian Expression, Lentiviral, CRISPR; Bacterial Resistance:Ampicillin
Defining Citation: PMID:39487265
Comments: Please visit https://www.biorxiv.org/content/10.1101/2023.05.12.540558v1 for bioRxiv preprint.
Proper citation: RRID:Addgene_195548 Copy
Species: Caenorhabditis elegans
Genetic Insert: no
Vector Backbone Description: Backbone Marker:stratagene; Backbone Size:5614; Vector Backbone:pBSK; Vector Types:Worm Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:38598630
Comments: Please visit for https://www.biorxiv.org/content/10.1101/2021.09.21.461278v4 bioRxiv preprint.
Proper citation: RRID:Addgene_200784 Copy
Species: Caenorhabditis elegans
Genetic Insert: snb-1
Vector Backbone Description: Backbone Marker:stratagene; Backbone Size:4321; Vector Backbone:pBSK; Vector Types:Worm Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:38598630
Comments: Please visit for https://www.biorxiv.org/content/10.1101/2021.09.21.461278v4 bioRxiv preprint.
Proper citation: RRID:Addgene_200785 Copy
Species: Homo sapiens
Genetic Insert: Lenti pEF-dEnAsCas12a-NLS-TopKRAB-3XHA-T2A-BSD
Vector Backbone Description: Vector Backbone:pAR010; Vector Types:Mammalian Expression, Lentiviral, CRISPR; Bacterial Resistance:Ampicillin
Defining Citation: PMID:39487265
Comments: Please visit https://www.biorxiv.org/content/10.1101/2023.05.12.540558v1 for bioRxiv preprint.
Proper citation: RRID:Addgene_195545 Copy
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