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URL: https://jydu.github.io/maffilter/
Proper Citation: MafFilter (RRID:SCR_024105)
Description: Software tool for analysis of genome alignments. It parses and manipulates MAF files as well as more simple fasta files. Despite various filtering options and format conversion tools, MafFilter can compute a wide range of statistics including phylogenetic trees, nucleotide diversity, inferrence of selection, etc.
Synonyms: MafFilter a genome alignment processor, maffilter
Resource Type: data analysis software, data processing software, software application, software resource
Defining Citation: PMID:24447531
Keywords: genome alignments analysis, parse and manipulate MAF files, genome alignment processor,
Availability: Free, Available for download, Freely available,
Resource Name: MafFilter
Resource ID: SCR_024105
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
The data sets included in this resource are published in Kravitz et al, 2012. Distinct roles for direct and indirect pathway striatal neurons in reinforcement (Nat. Neurosci).
