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URL: https://biop.github.io/ijp-imagetoatlas/
Proper Citation: Aligning Big Brains and Atlases (RRID:SCR_023857)
Description: Software Fiji plugin for registering thin serial sections: coronal, sagittal, horizontal, to compatible atlases including Allen Mouse Common Coordinate Framework, Waxholm Rat Brain Atlas, and all BrainGlobe atlases.
Abbreviations: ABBA
Synonyms: ABBA (Aligning Big Brains & Atlases)
Resource Type: software application, software resource
Keywords: Allen Mouse Common Coordinate Framework, Waxholm Rat Brain Atlas, BrainGlobe atlases,
Availability: Free, Freely available
Resource Name: Aligning Big Brains and Atlases
Resource ID: SCR_023857
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
The data sets included in this resource are published in Kravitz et al, 2012. Distinct roles for direct and indirect pathway striatal neurons in reinforcement (Nat. Neurosci).
