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URL: https://github.com/BlueBrain/atlas-densities
Proper Citation: Atlas Densities (RRID:SCR_023839)
Description: Software tools to compute densities in context of brain atlases. Used to create BBP Cell Atlas, using Allen Mouse Brain Atlas and collected literature density values.Provides list of volumetric files that provides cell type density estimates for each voxel of mouse brain volume.
Resource Type: software resource, software toolkit, source code
Keywords: Allen Mouse Brain Atlas, compute densities in context of brain atlases, create BBP Cell Atlas, collected literature density values, list of volumetric files, mouse brain volume,
Availability: Free, Available for download, Freely available
Resource Name: Atlas Densities
Resource ID: SCR_023839
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
The data sets included in this resource are published in Kravitz et al, 2012. Distinct roles for direct and indirect pathway striatal neurons in reinforcement (Nat. Neurosci).
