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URL: https://github.com/IBT-FMI/ABI-expression-data_generator
Proper Citation: ABI-expression-data-generator (RRID:SCR_023834)
Description: Software to download expression data from Allen Mouse Brain data portal ABI. This script will query database, download available data, convert it from the raw/mhd format to NIfTI, and register it to standard space. Package-manager-friendly archive of gene expression maps registered in SMRI standard space from the Allen Mouse Brain Atlas.
Resource Type: software application, software resource
Keywords: Allen Mouse Brain Atlas, gene expression maps, expression data, standard space registration, SMRI standard space,
Availability: Free, Available for download, Freely available
Resource Name: ABI-expression-data-generator
Resource ID: SCR_023834
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
The data sets included in this resource are published in Kravitz et al, 2012. Distinct roles for direct and indirect pathway striatal neurons in reinforcement (Nat. Neurosci).
