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URL: https://github.com/SainsburyWellcomeCentre/ara_tools
Proper Citation: ARA Tools (RRID:SCR_023826)
Description: Software package for analysis of mouse brain STP data with respect to the Allen Reference Atlas. Collection of MATLAB functions to analyze mouse whole brain imaging data and the associated "sparse" point data such as cell locations, traced neurite trees, or traced projections from a bulk injection. This package relates sparse data to the Allen Mouse Brain Reference Atlas.
Resource Type: software resource, software toolkit
Keywords: Allen Mouse Brain Reference Atlas, analyze mouse whole brain imaging data, cell locations, traced neurite trees, traced projections from bulk injection,
Availability: Free, Available for download, Freely available
Resource Name: ARA Tools
Resource ID: SCR_023826
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
The data sets included in this resource are published in Kravitz et al, 2012. Distinct roles for direct and indirect pathway striatal neurons in reinforcement (Nat. Neurosci).
