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URL: http://hms-dbmi.github.io/brainmapr/
Proper Citation: Brainmapr (RRID:SCR_023816)
Description: Software R package to the infer spatial location of neural progenitor subpopulations within the developing mouse brain by integrating single-cell RNA-seq data with in situ RNA patterns from the Allen Developing Mouse Brain Atlas.
Resource Type: software resource, software toolkit
Defining Citation: PMID:26780092
Keywords: Allen Developing Mouse Brain Atlas, infer spatial location, neural progenitor subpopulations, developing mouse brain, integrating single-cell RNA-seq data, in situ RNA patterns, Allen Developing Mouse Brain Atlas.
Availability: Free, Available for download, Freely available
Resource Name: Brainmapr
Resource ID: SCR_023816
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
The data sets included in this resource are published in Kravitz et al, 2012. Distinct roles for direct and indirect pathway striatal neurons in reinforcement (Nat. Neurosci).
