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URL: https://targetranger.maayanlab.cloud/
Proper Citation: TargetRanger (RRID:SCR_023621)
Description: Web server application that identifies targets from user inputted RNA-seq samples collected from cells we wish to target. By comparing inputted samples with processed RNA-seq and proteomics data from several atlases, TargetRanger identifies genes that are highly expressed in target cells while lowly expressed across normal human cell types, tissues, and cell lines.
Resource Type: data access protocol, software resource, web service
Defining Citation: PMID:37166966
Keywords: identify targets, identify genes, user inputted RNA-seq samples, target cells, proteomics data, human cells,
Funding: NCI U24CA224260; NCI U24CA264250; NCI U24CA271114; NIDDK R01DK131525; NIDDK RC2DK131995; NIH Office of the Director OT2OD030160
Availability: Free, Freely available
Resource Name: TargetRanger
Resource ID: SCR_023621
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
The data sets included in this resource are published in Kravitz et al, 2012. Distinct roles for direct and indirect pathway striatal neurons in reinforcement (Nat. Neurosci).
