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URL: https://usegalaxy.eu
Proper Citation: Data independent acquisition proteomics workbench (RRID:SCR_021862)
Description: Software tools for analysis of data independent acqusition type proteomics data are implemented in Galaxy framework. Enables complete DIA data analysis including spectral library generation based on DDA type data, analysis of DIA data in raw or mzml format, and differntial statistical analysis. All tools are based on open-source software such as diypasef, OpenSwath, swath2stats and MSstats.
Resource Type: software resource, software toolkit
Defining Citation: DOI:10.1101/2021.07.21.453197
Keywords: data independent acqusition, proteomics data, Galaxy framework,
Availability: Free, Freely available
Resource Name: Data independent acquisition proteomics workbench
Resource ID: SCR_021862
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
The data sets included in this resource are published in Kravitz et al, 2012. Distinct roles for direct and indirect pathway striatal neurons in reinforcement (Nat. Neurosci).
