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URL: https://zhanglab.c2b2.columbia.edu/index.php/CTK_Documentation
Proper Citation: CLIP Tool Kit (RRID:SCR_019034)
Description: Software package that provides set of tools for analysis of CLIP data starting from raw reads generated by sequencer.
Abbreviations: CTK
Resource Type: data analysis software, data processing software, software application, software resource, software toolkit
Keywords: CLIP data, data analysis, raw reads, sequencer data generation, genome assemblies, data
Availability: Free, Available for download, Freely available
Resource Name: CLIP Tool Kit
Resource ID: SCR_019034
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
The data sets included in this resource are published in Kravitz et al, 2012. Distinct roles for direct and indirect pathway striatal neurons in reinforcement (Nat. Neurosci).
