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URL: http://alggen.lsi.upc.es/cgi-bin/promo_v3/promo/promoinit.cgi?dirDB=TF_8.3
Proper Citation: ALGGEN-PROMO (RRID:SCR_016926)
Description: Web tool to identify putative transcription factor binding sites (TFBS) in DNA sequences from a species or groups of species of interest. Used for detection of known transcription regulatory elements using species-tailored searches.
Synonyms: PROMO, ALGorithmics and GENetics PROMO, ALGGEN, ALGGEN-PROMO
Resource Type: data analysis software, data or information resource, data processing software, laboratory portal, organization portal, portal, sequence analysis software, service resource, software application, software resource
Defining Citation: PMID:11847087, PMID:12824386
Keywords: identify, transcription, factor, binding, site, DNA, sequence, species, regulatory, element, search
Availability: Free, Available for download, Freely available
Resource Name: ALGGEN-PROMO
Resource ID: SCR_016926
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
The data sets included in this resource are published in Kravitz et al, 2012. Distinct roles for direct and indirect pathway striatal neurons in reinforcement (Nat. Neurosci).
