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URL: https://github.com/cerebis/sim3C/tree/0.1
Proper Citation: Sim3C (RRID:SCR_015772)
Description: Software for read-pair simulation of 3C-based sequencing methodologies (HiC, Meta3C, DNase-HiC). Sim3C's potential applications include addressing questions directed at the spatial organization of DNA in samples of eukaryotic tissue, single cells, and microbial communities.
Resource Type: simulation software, software application, software resource
Keywords: hic, simulation, dna sequencing, python, 3c, read-pair simulation, chromosome conformation capture
Funding: Australian Research Council LP150100912; Education Investment Fund (EIF) ; National Collaborative Research Infrastructure Strategy (NCRIS)
Availability: Free, Available for download
Resource Name: Sim3C
Resource ID: SCR_015772
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
The data sets included in this resource are published in Kravitz et al, 2012. Distinct roles for direct and indirect pathway striatal neurons in reinforcement (Nat. Neurosci).
