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URL: http://www.openbioinformatics.org/annovar/
Proper Citation: ANNOVAR (RRID:SCR_012821)
Description: An efficient software tool to utilize update-to-date information to functionally annotate genetic variants detected from diverse genomes (including human genome hg18, hg19, as well as mouse, worm, fly, yeast and many others). Given a list of variants with chromosome, start position, end position, reference nucleotide and observed nucleotides, ANNOVAR can perform: 1. gene-based annotation. 2. region-based annotation. 3. filter-based annotation. 4. other functionalities. (entry from Genetic Analysis Software)
Abbreviations: ANNOVAR
Synonyms: functional ANNOtation of genetic VARiants, ANNOVAR: Functional annotation of genetic variants
Resource Type: software application, software resource
Defining Citation: PMID:20601685
Keywords: genomic analysis, imaging genomics, next generation sequencing, snp, gene, bio.tools
Availability: Free
Resource Name: ANNOVAR
Resource ID: SCR_012821
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
The data sets included in this resource are published in Kravitz et al, 2012. Distinct roles for direct and indirect pathway striatal neurons in reinforcement (Nat. Neurosci).
