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URL: https://github.com/BRAINSia/BRAINSTools/tree/master/BRAINSDemonWarp
Proper Citation: BRAINSDemonWarp (RRID:SCR_009524)
Description: A command line program for image registration by using different methods including Thirion and diffeomorphic demons algorithms. The function takes in a template image and a target image along with other optional parameters and registers the template image onto the target image. The resultant deformation fields and metric values can be written to a file. The program uses the Insight Toolkit (www.ITK.org) for all the computations, and can operate on any of the image types supported by that library. This a an ITK based implementation of various forms of Thirion Demons based registration (including diffeomorphic demons registration originating from Tom Vercauteren at INRIA ).
Abbreviations: BRAINSDemonWarp
Resource Type: data processing software, image analysis software, registration software, software application, software resource
Keywords: magnetic resonance
Funding: NINDS NS050568; NINDS NS40068; NIMH MH31593; NIMH MH40856
Resource Name: BRAINSDemonWarp
Resource ID: SCR_009524
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
The data sets included in this resource are published in Kravitz et al, 2012. Distinct roles for direct and indirect pathway striatal neurons in reinforcement (Nat. Neurosci).
