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Proper Citation: Phenote: A Phenotype Annotation Tool using Ontologies (RRID:SCR_008334)
Description: Phenote is both a complete piece of software and a software toolkit designed to facilitate the annotation of biological phenotypes using ontologies. It provides an interface and infrastructure to record genotype-phenotype pairs, together with the provenance for the annotation. Typical users of Phenote include literature curators, laboratory researchers, and clinicians looking for a method to record data in a user-friendly and computable way. Features of Phenote include the use of any OBO-format ontology, ontology navigation and term information display, bulk sort, copy, edit, and delete of phenotype-genotype character entries, and a variety of export formats. Phenote is a project of the Berkeley Bioinformatics Open-Source Projects (BBOP).
Synonyms: Phenote
Resource Type: software resource, software toolkit
Keywords: biological, genotype, literature, ontology, phenotype, research, software, toolkit
Resource Name: Phenote: A Phenotype Annotation Tool using Ontologies
Resource ID: SCR_008334
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
The data sets included in this resource are published in Kravitz et al, 2012. Distinct roles for direct and indirect pathway striatal neurons in reinforcement (Nat. Neurosci).
