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URL: http://www.math.hkbu.edu.hk/~mng/CLUSTAG/CLUSTAG.html
Proper Citation: CLUSTAG (RRID:SCR_001816)
Description: Software application that uses hierarchical clustering and graph methods for selecting tag SNPs (single nucleotide polymorphisms). Cluster and set-cover algorithms are developed to obtain a set of tag SNPs that can represent all the known SNPs in a chromosomal region, subject to the constraint that all SNPs must have a squared correlation R2 > C with at least one tag SNP, where C is specified by the user. The program is implemented with Java, and it can run in Windows platform as well as the Unix environment.
Abbreviations: CLUSTAG
Synonyms: CLUSTAG: Hierarchical Clustering and Graph Methods for Selecting Tag SNPs
Resource Type: software application, software resource
Defining Citation: PMID:15585525
Keywords: gene, genetic, genomic, java, hierarchical clustering, single nucleotide polymorphism, windows, unix
Availability: THIS RESOURCE IS NO LONGER IN SERVICE
Resource Name: CLUSTAG
Resource ID: SCR_001816
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
The data sets included in this resource are published in Kravitz et al, 2012. Distinct roles for direct and indirect pathway striatal neurons in reinforcement (Nat. Neurosci).
