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URL: https://www.broadinstitute.org/birdsuite/birdsuite
Proper Citation: BIRDSUITE (RRID:SCR_001794)
Description: Open-source set of tools to detect and report SNP genotypes, common Copy-Number Polymorphisms (CNPs), and novel, rare, or de novo CNVs in samples processed with the Affymetrix platform. While most of the components of the suite can be run individually (for instance, to only do SNP genotyping), the Birdsuite is especially intended for integrated analysis of SNPs and CNVs.
Abbreviations: Birdsuite
Resource Type: software application, software resource
Defining Citation: PMID:18776909
Keywords: gene, genetic, genomic, snp, genotype, copy number polymorphism, copy number variant, affymetrix
Availability: Free, Available for download, Freely available
Resource Name: BIRDSUITE
Resource ID: SCR_001794
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
The data sets included in this resource are published in Kravitz et al, 2012. Distinct roles for direct and indirect pathway striatal neurons in reinforcement (Nat. Neurosci).
