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URL: http://mugsy.sourceforge.net/
Proper Citation: Mugsy (RRID:SCR_001414)
Description: Software resource for multiple whole genome alignment. It uses Nucmer, a custom graph-based segmentation procedure, for pairwise alignment, and the Seqan:TCoffee's multiple alignment strategy.
Resource Type: data analysis software, data processing software, sequence analysis software, software application, software resource
Defining Citation: PMID:21148543, DOI:10.1093/bioinformatics/btq665
Keywords: software, genome, genome alignment, segmentation, pairwise alignment, sequence analysis software
Availability: Free, Available for download, Freely available
Resource Name: Mugsy
Resource ID: SCR_001414
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
The data sets included in this resource are published in Kravitz et al, 2012. Distinct roles for direct and indirect pathway striatal neurons in reinforcement (Nat. Neurosci).
