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URL: http://astridbio.com/genominer-genome-analyzer/
Proper Citation: GenoMiner (RRID:SCR_001202)
Description: THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 23,2022. A next generation sequencing data analysis computer for biologists with or without IT background. It has an easy to-use graphical interface to analyze sequencing data in with only 15 clicks. A range of standard, add-on and custom applications help analyze and visualize data generated by Next Generation Sequencing machines. These are installed on each GenoMiner by default: * Reference assembly * De novo assembly * ChiP-Seq * BLAST * Hybrid de novo assembly * Hybrid reference assembly Add-on applications: * Quality assesment * RNA-Seq * Copy Number Variation (CNV) * Multiple Sequence Alignment * miRNA-Seq * Variant Calling
Abbreviations: GenoMiner
Synonyms: GenoMiner: Genome Analyzer
Resource Type: software resource
Defining Citation: PMID:16267081
Keywords: next-generation sequencing, reference assembly, de novo assembly, chip-seq, blast, hybrid de novo assembly, hybrid reference assembly, genome, computer, hardware, instrument, equipment
Availability: THIS RESOURCE IS NO LONGER IN SERVICE
Resource Name: GenoMiner
Resource ID: SCR_001202
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
The data sets included in this resource are published in Kravitz et al, 2012. Distinct roles for direct and indirect pathway striatal neurons in reinforcement (Nat. Neurosci).
