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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
http://www.wormbase.org/db/get?name=WBStrain00036312
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00000254(bli-4)|WBGene00001039(dnj-21)
Genomic Alteration: WBGene00000254(bli-4), WBGene00001039(dnj-21)
Availability: available
References:
Synonyms: dnj-21(ok1577) I/hT2 [bli-4(e937) let-?(q782) qIs48] (I;III).
Alternate IDs: WB-STRAIN:VC1085, CGC_VC1085
Notes: Mutagen:UV/TMP|"T19B4.4. Homozygous lethal deletion chromosome balanced by bli-4- and GFP-marked translocation. Heterozygotes are WT with pharyngeal GFP signal, and segregate WT GFP, arrested hT2 aneuploids, and non-GFP ok1577 homozygotes (early larval arrest). Homozygous hT2[bli-4 let-? qIs48] inviable. Note: qIs48 has been observed to recombine off hT2, typically leaving behind a functional homozygous viable hT2 with Bli-4 phenotype. Pick WT GFP and check for correct segregation of progeny to maintain."|"This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00036312 Copy
http://www.wormbase.org/db/get?name=WBStrain00036316
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00003368(mkk-4)
Genomic Alteration: WBGene00003368(mkk-4)
Availability: available
References:
Synonyms: mkk-4(ok1545) X.
Alternate IDs: WB-STRAIN:VC1089, CGC_VC1089
Notes: F42G10.2. Superficially wild type.|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00036316 Copy
http://www.wormbase.org/db/get?name=WBStrain00036329
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00003056(lon-2)|WBGene00003752(nlp-14)
Genomic Alteration: WBGene00003056(lon-2), WBGene00003752(nlp-14)
Availability: available
References:
Synonyms: +/szT1 [lon-2(e678)] I; nlp-14(ok1517)/szT1 X.
Alternate IDs: WB-STRAIN:VC1108, CGC_VC1108
Notes: D1009.4. Apparent homozygous lethal deletion chromosome balanced by lon-2-marked translocation. Heterozygotes are WT, and segregate WT, Lon-2 males, arrested szT1 aneuploids, and ok1517 homozygotes (arrest stage/phenotype undetermined). Pick WT and check for correct segregation of progeny to maintain.|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00036329 Copy
http://www.wormbase.org/db/get?name=WBStrain00036328
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00022235(sqd-1)
Genomic Alteration: WBGene00022235(sqd-1)
Availability: available
References:
Synonyms: sqd-1(ok1582) IV/nT1 [qIs51] (IV;V).
Alternate IDs: WB-STRAIN:VC1106, CGC_VC1106
Notes: Mutagen:UV/TMP|"This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."|"Y73B6BL.6. Homozygous lethal deletion chromosome balanced by GFP-marked translocation. Heterozygotes are WT with pharyngeal GFP signal, and segregate WT GFP, arrested nT1[qIs51] aneuploids, and non-GFP ok1582 homozygotes (sterile adult). Homozygous nT1[qIs51] inviable. Pick WT GFP and check for correct segregation of progeny to maintain."
Proper citation: RRID:WB-STRAIN:WBStrain00036328 Copy
http://www.wormbase.org/db/get?name=WBStrain00036323
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00002008(hsp-4)
Genomic Alteration: WBGene00002008(hsp-4)
Availability: available
References:
Synonyms: hsp-4(gk514) II.
Alternate IDs: WB-STRAIN:VC1099, CGC_VC1099
Notes: F43E2.8. Superficially wild type.|"Mutagen:UV/TMP"|"Supplementary_genotype hsp-4(gk514) II"|"This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."|"WBStrain provided so WBPaper00061805 paper added based on AFP_Strain data."
Proper citation: RRID:WB-STRAIN:WBStrain00036323 Copy
http://www.wormbase.org/db/get?name=WBStrain00036322
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00003922(pas-1)|WBGene00007616(rpoa-12)
Genomic Alteration: WBGene00003922(pas-1), WBGene00007616(rpoa-12)
Availability: available
References:
Synonyms: pas-1&C15H11.8(ok1531) V/nT1 [qIs51] (IV;V).
Alternate IDs: WB-STRAIN:VC1097, CGC_VC1097
Notes: C15H11.7, C15H11.8. Homozygous lethal deletion chromosome balanced by GFP-marked translocation. Heterozygotes are WT with pharyngeal GFP signal, and segregate WT GFP, arrested nT1[qIs51] aneuploids, and non-GFP ok1531 homozygotes (probable early larval arrest). Homozygous nT1[qIs51] inviable. Pick WT GFP and check for correct segregation of progeny to maintain.|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00036322 Copy
http://www.wormbase.org/db/get?name=WBStrain00036327
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00019230(ttll-11)
Genomic Alteration: WBGene00019230(ttll-11)
Availability: available
References:
Synonyms: ttll-11(gk482) IV.
Alternate IDs: WB-STRAIN:VC1105, CGC_VC1105
Notes: H23L24.3b. Superficially wild type.|"Made_by: Vancouver KO Group"|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00036327 Copy
http://www.wormbase.org/db/get?name=WBStrain00036330
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00001956(hlh-12)|WBGene00004995(spp-10)
Genomic Alteration: WBGene00001956(hlh-12), WBGene00004995(spp-10)
Availability: available
References:
Synonyms: spp-10&hlh-12(ok1532) IV.
Alternate IDs: WB-STRAIN:VC1109, CGC_VC1109
Notes: C28C12.7, C28C12.8. Often sickly, otherwise superficially wild type. External left primer: TGTCAAGAATGTCATCCCCA. External right primer: TTAAAATGGCGAAGAAACCG. Internal left primer: CCATCTAGCCCCATCTCAAA. Internal right primer: CCGAGATGAACGGAATGTTT. Internal WT amplicon: 2182 bp. Deletion size: 1866 bp. Deletion left flank: ATCTAGCCCCATCTCAAATGCTCACAATCT. Deletion right flank: ACAGTTATTGCGTCTATGTCACTATTTGAA.|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00036330 Copy
http://www.wormbase.org/db/get?name=WBStrain00036417
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00007651(nra-3)
Genomic Alteration: WBGene00007651(nra-3)
Availability: available
References:
Synonyms: C17G1.4(ok1679) X.
Alternate IDs: WB-STRAIN:VC1208, CGC_VC1208
Notes: C17G1.4. Superficially wild type. External left primer: AACGTGTGAGTTCAGTGGGA. External right primer: TGCTTCAGAATTAATGGGGC. Internal left primer: GATTTTCACGCATGTTGCAG. Internal right primer: AATTAATTGGGCGCTTGATG. Internal WT amplicon: 3026 bp. Deletion size: 973 bp.|"This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00036417 Copy
http://www.wormbase.org/db/get?name=WBStrain00036418
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00009435(F35G2.1)
Genomic Alteration: WBGene00009435(F35G2.1)
Availability: available
References:
Synonyms: F35G2.1(ok1669) IV.
Alternate IDs: WB-STRAIN:VC1209, CGC_VC1209
Notes: F35G2.1. Superficially wild type. External left primer: GCGCTTTTCTTGTCGAGTTC. External right primer: GAACGAGCTAGGATTGCAGG. Internal left primer: GGTCCGTGATTGGTATCCAG. Internal right primer: GTTCGTTCAGAAGGCGAGAC. Internal WT amplicon: 3267 bp. Deletion size: 1711 bp.|"This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00036418 Copy
http://www.wormbase.org/db/get?name=WBStrain00036497
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00004884(smg-6)
Genomic Alteration: WBGene00004884(smg-6)
Availability: available
References:
Synonyms: smg-6(ok1794) III.
Alternate IDs: WB-STRAIN:VC1305, CGC_VC1305
Notes: This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use.|"Y54F10AL.2. Superficially wild type. External left primer: TAGCTAGCCCATGTGCCTTT. External right primer: TTTTGCGATGTGAATCGTGT. Internal left primer: TTTTAGCCACACCATCCACA. Internal right primer: CCAAAAACATGGGAAAATCG. Internal WT amplicon: 3113 bp. Deletion size: 920 bp. Deletion left flank: CAATTAAAAATTTTTTTTCTTGATTTTCTA. Deletion right flank: AAAATTGTGTCTAGGGGTGAAAAATTGCGA."
Proper citation: RRID:WB-STRAIN:WBStrain00036497 Copy
http://www.wormbase.org/db/get?name=WBStrain00036411
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00000254(bli-4)|WBGene00006820(unc-89)
Genomic Alteration: WBGene00000254(bli-4), WBGene00006820(unc-89)
Availability: available
References:
Synonyms: unc-89(ok1658) I/hT2 [bli-4(e937) let-?(q782) qIs48] (I;III).
Alternate IDs: WB-STRAIN:VC1201, CGC_VC1201
Notes: C09D1.1. Homozygous lethal deletion chromosome balanced by bli-4- and GFP-marked translocation. Heterozygotes are WT with pharyngeal GFP signal, and segregate WT GFP, arrested hT2 aneuploids, and non-GFP ok1658 homozygotes (probable early larval arrest). Homozygous hT2[bli-4 let-? qIs48] inviable. Pick WT GFP and check for correct segregation of progeny to maintain. External left primer: TCAAGTTCTTTTCGGGTTGG. External right primer: AGCGAAAGAGCAGCATGATT. Internal left primer: TCAAACAGCGCATGAAAAAC. Internal right primer: TACCCAAAAACGGAAAATCG. Internal WT amplicon: 2637 bp. Deletion size: 1274 bp. Deletion left flank: TCCTATCATCTATTTCATTCGATCAAACAA. Deletion right flank: ATTTTGGGGGGGGGGGGGGGCAGAAATCGG. Breakpoints should be confirmed; deletion may also involve insertion and/or rearrangement of sequence between external left and internal left primers.|"This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00036411 Copy
http://www.wormbase.org/db/get?name=WBStrain00036499
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00018701(pccb-1)
Genomic Alteration: WBGene00018701(pccb-1)
Availability: available
References:
Synonyms: F52E4.1(ok1686) X.
Alternate IDs: WB-STRAIN:VC1307, CGC_VC1307
Notes: F52E4.1. Superficially wild type. External left primer: AAGAACCTTGATTCGCAGGA. External right primer: GAGTGGAATGTTTCCGTGCT. Internal left primer: CCGTTGAGAACCGATTTGAT. Internal right primer: GTTCAAATCCTCGCACACCT. Internal WT amplicon: 2518 bp. Deletion size: 1301 bp.|"This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00036499 Copy
http://www.wormbase.org/db/get?name=WBStrain00036413
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00003627(nhr-34)
Genomic Alteration: WBGene00003627(nhr-34)
Availability: available
References:
Synonyms: nhr-34(gk556) IV.
Alternate IDs: WB-STRAIN:VC1204, CGC_VC1204
Notes: F58G6.5. External left primer: CACCATCACATCCAGCTTTG. External right primer: TCGATTTTGTATTCCCTCGC. Internal left primer: TCGGCACCAAGCAATATGTA. Internal right primer: AAGCTTCTTGCGCTTTGAAC. Internal WT amplicon: 1669 bp. Deletion size: 1067 bp. Deletion left flank: ACATCAACTCTGCACAATTGATCGAATTCC. Deletion right flank: TACTATCTCAGATAATTTCTCTGTAACATT.|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00036413 Copy
http://www.wormbase.org/db/get?name=WBStrain00036415
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00016365(nhr-139)
Genomic Alteration: WBGene00016365(nhr-139)
Availability: available
References:
Synonyms: nhr-139(gk559) V.
Alternate IDs: WB-STRAIN:VC1206, CGC_VC1206
Notes: C33G8.8. Superficially wild type. External left primer: TAAAACGCTCGCCAAAATCT. External right primer: AAATTTGCGACAGTTGACCC. Internal left primer: CCATCTGCAGAGAAAGGCTC. Internal right primer: AGCTGCAAAGCTGTGTCGTA. Internal WT amplicon: 2376 bp. Deletion size: 1714 bp. Deletion left flank: AGGGTCATTTGGAACCCCAAATAATCATTT. Deletion right flank: AAACCCCGTATGATGAAAAAAAAATCAAAA.|"Made_by: Vancouver KO Group"|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00036415 Copy
http://www.wormbase.org/db/get?name=WBStrain00036414
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00016365(nhr-139)|WBGene00016366(nhr-140)|WBGene00016368(nhr-163)
Genomic Alteration: WBGene00016365(nhr-139), WBGene00016366(nhr-140), WBGene00016368(nhr-163)
Availability: available
References:
Synonyms: nhr-163&nhr-139&nhr-140(gk566) V.
Alternate IDs: WB-STRAIN:VC1205, CGC_VC1205
Notes: C33G8.12, C33G8.8, C33G8.9. Superficially wild type. External left primer: TAAAACGCTCGCCAAAATCT. External right primer: AAATTTGCGACAGTTGACCC. Internal left primer: CCATCTGCAGAGAAAGGCTC. Internal right primer: AGCTGCAAAGCTGTGTCGTA. Internal WT amplicon: 2376 bp. Deletion size: 2236 bp. Deletion left flank: GGCTGGTTAATATATAATAAAAAATCATTC. Deletion right flank: GTTACGACACAGCTTTGCAGCTTCTTCACT.|"Made_by: Vancouver KO Group"|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00036414 Copy
http://www.wormbase.org/db/get?name=WBStrain00036428
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00003148(mbf-1)
Genomic Alteration: WBGene00003148(mbf-1)
Availability: available
References:
Synonyms: mbf-1(gk562) IV.
Alternate IDs: WB-STRAIN:VC1222, CGC_VC1222
Notes: H21P03.1. Superficially wild type. External left primer: CAGGCATCATCCAATGACAG. External right primer: TGCACTTTTCTCCTCTCGGT. Internal left primer: TGCATATCCCAACATTCCAA. Internal right primer: TCTTTGCTAACCGGCTGTCT. Internal WT amplicon: 1923 bp. Deletion size: 1428 bp. Deletion left flank: AATCATGTCACAGTCATGGATTTAAAATGA. Deletion right flank: ACCAGAAAACTCTATTCCAATATAGCAATA.|"Made_by: Vancouver KO Group"|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00036428 Copy
http://www.wormbase.org/db/get?name=WBStrain00036420
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00022242(sfrp-1)
Genomic Alteration: WBGene00022242(sfrp-1)
Availability: available
References:
Synonyms: Y73B6BL.21(gk554) IV.
Alternate IDs: WB-STRAIN:VC1212, CGC_VC1212
Notes: Made_by: Vancouver KO Group|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."|"WBStrain mapped, WBPaper00060132 added based on AFP_Strain data."|"Y73B6BL.21. Superficially wild type. External left primer: TTACCCCGATGACTCACTCC. External right primer: AACCAAGCGGAACATTTTTG. Internal left primer: GCAAGTTGGCTCAAATCTCC. Internal right primer: CACTGGTGGCTCATCTTTCA. Internal WT amplicon: 1651 bp. Deletion size: 1261 bp. Deletion left flank: TTAGCGGGCTGCATTGGTTTTATACACATA. Deletion right flank: ATCTTCATAAATTTTCACAATTTATGCACA."
Proper citation: RRID:WB-STRAIN:WBStrain00036420 Copy
http://www.wormbase.org/db/get?name=WBStrain00036424
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00002101(ins-18)
Genomic Alteration: WBGene00002101(ins-18)
Availability: available
References:
Synonyms: ins-18(ok1672) I.
Alternate IDs: WB-STRAIN:VC1218, CGC_VC1218
Notes: T28B8.2. Superficially wild type. External left primer: TTCAGATTGCTCGAAAGGCT. External right primer: GCCATTGTATCCATCCCATC. Internal left primer: CGTCGCCACTATTCCAAAAT. Internal right primer: CGTATTTTGTGGGCGGTACT. Internal WT amplicon: 2143 bp. Deletion size: 940 bp. Deletion left flank: AAGCTGGTTTGTTTTCATGTTTGTAATACA. Deletion right flank: TTTGGCAATTGGCAATTATTTAATTCTTTT.|"This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00036424 Copy
http://www.wormbase.org/db/get?name=WBStrain00036425
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00018023(set-11)
Genomic Alteration: WBGene00018023(set-11)
Availability: available
References:
Synonyms: F34D6.4(ok1691) II.
Alternate IDs: WB-STRAIN:VC1219, CGC_VC1219
Notes: F34D6.4. Superficially wild type. External left primer: CTACTGCCAGAGAAGGCGAC. External right primer: AACCCTAACGTATCCCCACC. Internal left primer: TACATTCCGACGACTTGCAG. Internal right primer: CCCACAGTAACCCCACAGTC. Internal WT amplicon: 3166 bp. Deletion size: 1731 bp.|"This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00036425 Copy
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