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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
http://www.wormbase.org/db/get?name=WBStrain00029590
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: otEx4503.
Alternate IDs: WB-STRAIN:OH10162, CGC_OH10162
Notes: otEx4503 [hlh-16::GFP + rol-6(su1006)]. Translation HLH-16::GFP reporter. Pick Rollers to maintain. Reference: Bertrand et al. (2011) Current Biology 21, 1225-1231.
Proper citation: RRID:WB-STRAIN:WBStrain00029590 Copy
http://www.wormbase.org/db/get?name=WBStrain00029508
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00016029(elf-1)
Genomic Alteration: WBGene00016029(elf-1)
Availability: available
References:
Synonyms: C24A1.2(tm801) III; vtIs1 V.
Alternate IDs: WB-STRAIN:OH7159, CGC_OH7159
Notes: vtIs1 [dat-1p::GFP + rol-6(su1006)] V. Rollers. Reference: Flames N, Hobert O, 2009 Nature 458, 885-889.
Proper citation: RRID:WB-STRAIN:WBStrain00029508 Copy
http://www.wormbase.org/db/get?name=WBStrain00029504
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00003018(lin-32)
Genomic Alteration: WBGene00003018(lin-32)
Availability: available
References:
Synonyms: vtIs1 vsIs33 V; lin-32(ot366) X.
Alternate IDs: WB-STRAIN:OH7118, CGC_OH7118
Notes: vtIs1 [dat-1p::GFP + rol-6(su1006)] V. vsIs33 [dop-3::RFP] V. Missing CEPVs and PDEs; ADEs variably affected.
Proper citation: RRID:WB-STRAIN:WBStrain00029504 Copy
http://www.wormbase.org/db/get?name=WBStrain00029588
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00004949(sox-2)|WBGene00006843(unc-119)
Genomic Alteration: WBGene00004949(sox-2), WBGene00006843(unc-119)
Availability: available
References:
Synonyms: unc-119(ed3) III; sox-2(ot640[unc-119(+)]) X; otEx4454.
Alternate IDs: WB-STRAIN:OH10053, CGC_OH10053
Notes: otEx4454 [sox-2(fosmid)::mCherry + elt-2p::DsRed]. ot640 was generated by using MosDel removing the entire sox-2 locus and insert unc-119(+). ot640 homozygous arrest in L1 with a pharynx unattached (Pun) phenotype. Maintain by picking WT DsRed+ to maintain. Reference: Vidal B, et al. Development. 2015 Jul 15;142(14):2464-77.|"otEx4454 [sox-2(fosmid)::mCherry + elt-2p::DsRed]. ot640 was generated by using MosDel removing the entire sox-2 locus and insert unc-119(+). ot640 homozygous arrest in L1 with a pharynx unattached (Pun) phenotype. Maintain by picking WT to maintain (transgene should be required for viability). Reference: Vidal B, et al. Development. 2015 Jul 15;142(14):2464-77."
Proper citation: RRID:WB-STRAIN:WBStrain00029588 Copy
http://www.wormbase.org/db/get?name=WBStrain00029503
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00000254(bli-4)|WBGene00001534(gcy-7)|WBGene00001578(ges-1)|WBGene00003514(myo-2)|WBGene00003983(pes-10)|WBGene00006829(unc-101)|WBGene00009188(lsy-22)
Genomic Alteration: WBGene00000254(bli-4), WBGene00001534(gcy-7), WBGene00001578(ges-1), WBGene00003514(myo-2), WBGene00003983(pes-10), WBGene00006829(unc-101), WBGene00009188(lsy-22)
Availability: available
References:
Synonyms: lsy-22(ot114) unc-101(m1) I/hT2 [bli-4(e937) let-?(q782) qIs48] (I;III); otIs3 V.
Alternate IDs: WB-STRAIN:OH7116, CGC_OH7116
Notes: Made_by: Eileen Flowers|"otIs3 [gcy-7::GFP + lin-15(+)]. qIs48 [myo-2::GFP + pes-10::GFP + ges-1::GFP]. Homozygous hT2 animals are inviable. Heterozygotes are WT and GFP+. Homozygous lsy-22(ot114) unc-101(m1) animals are Unc and have a maternal effect embryonic lethal phenotype. Whole genome sequenced strain."
Proper citation: RRID:WB-STRAIN:WBStrain00029503 Copy
http://www.wormbase.org/db/get?name=WBStrain00029540
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: otEx3403.
Alternate IDs: WB-STRAIN:OH7689, CGC_OH7689
Notes: otEx3403 [unc-14p::hif-1(P621A)::YFP(cDNA) + rol-6(su1006)]. Line 3. Pick Rollers.
Proper citation: RRID:WB-STRAIN:WBStrain00029540 Copy
http://www.wormbase.org/db/get?name=WBStrain00029541
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: otEx3398.
Alternate IDs: WB-STRAIN:OH7690, CGC_OH7690
Notes: otEx3398 [unc-14p::hif-1::YFP(cDNA) + rol-6(su1006)]. Line 1. Pick Rollers.
Proper citation: RRID:WB-STRAIN:WBStrain00029541 Copy
http://www.wormbase.org/db/get?name=WBStrain00029542
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: otEx3399.
Alternate IDs: WB-STRAIN:OH7691, CGC_OH7691
Notes: otEx3399 [unc-14p::hif-1::YFP(cDNA) + pRF4]. Line 2. Pick Rollers.|"otEx3399 [unc-14p::hif-1::YFP(cDNA) + rol-6(su1006)]. Line 2. Pick Rollers."
Proper citation: RRID:WB-STRAIN:WBStrain00029542 Copy
http://www.wormbase.org/db/get?name=WBStrain00029539
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: otEx3402.
Alternate IDs: WB-STRAIN:OH7688, CGC_OH7688
Notes: otEx3402 [unc-14p::hif-1(P621A)::YFP(cDNA) + rol-6(su1006)]. Line 2. Pick Rollers.|"otEx3402[unc-14p::hif-1(P621A)::YFP(cDNA) + pRF4]. Line 2. Pick Rollers."
Proper citation: RRID:WB-STRAIN:WBStrain00029539 Copy
http://www.wormbase.org/db/get?name=WBStrain00029536
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00003657(nhr-67)
Genomic Alteration: WBGene00003657(nhr-67)
Availability: available
References:
Synonyms: nhr-67(ok631) IV; otEx3362.
Alternate IDs: WB-STRAIN:OH7631, CGC_OH7631
Notes: otEx3362 [nhr-67(fosmid)::mCherry + elt-2::GFP]. Pick GFP+ to maintain. otEx3362 rescues nhr-67(ok631).
Proper citation: RRID:WB-STRAIN:WBStrain00029536 Copy
http://www.wormbase.org/db/get?name=WBStrain00029528
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: otIs193 syIs63 IV.
Alternate IDs: WB-STRAIN:OH7310, CGC_OH7310
Notes: Mutagen:Gamma rays|"otIs193 [cog-1p::lsy-6hp + rol-6(su1006)]; derived from otEx1450. syIs63 [cog-1::GFP + unc-119(+)]. Egl. Pvul."
Proper citation: RRID:WB-STRAIN:WBStrain00029528 Copy
http://www.wormbase.org/db/get?name=WBStrain00029529
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00004397(rol-6)|WBGene00017683(rbbp-5)
Genomic Alteration: WBGene00004397(rol-6), WBGene00017683(rbbp-5)
Availability: available
References:
Synonyms: F21H12.1(ot86) rol-6(e187) II; ntIs1 V.
Alternate IDs: WB-STRAIN:OH7317, CGC_OH7317
Notes: Made_by: Eileen Flowers|"ntIs1 [gcy-5p::GFP + lin-15(+)] V. Ectopic expression of ntIs1 in ASEL. Rollers. Whole genome sequenced strain."
Proper citation: RRID:WB-STRAIN:WBStrain00029529 Copy
http://www.wormbase.org/db/get?name=WBStrain00029522
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: zdIs13 IV; otEx3156.
Alternate IDs: WB-STRAIN:OH7237, CGC_OH7237
Notes: zdIs13 [tph-1p::GFP] IV. otEx3156 [dpy-7p::hif-1(p621A) + ttx-3::RFP]. Line 3.
Proper citation: RRID:WB-STRAIN:WBStrain00029522 Copy
http://www.wormbase.org/db/get?name=WBStrain00029686
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00000476(cfi-1)
Genomic Alteration: WBGene00000476(cfi-1)
Availability: available
References:
Synonyms: cfi-1(ot786) I.
Alternate IDs: WB-STRAIN:OH12344, CGC_OH12344
Notes: De-repression of ectopic effector genes in DA/DB class motor neurons. Reference: Kerk SY, et al. Neuron. 2017 (in press).
Proper citation: RRID:WB-STRAIN:WBStrain00029686 Copy
http://www.wormbase.org/db/get?name=WBStrain00029682
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00004010(pha-1)
Genomic Alteration: WBGene00004010(pha-1)
Availability: available
References:
Synonyms: pha-1(e2123) III; otIs453.
Alternate IDs: WB-STRAIN:OH11876, CGC_OH11876
Notes: Mutagen:integrated by UV|"otIs453 [itr-1::GFP::utr-1a 3' UTR + pha-1(+)]. itr-1::GFP reporter contains sequence from 2282bp upstream of exon 2 of itr-1a through end of exon 3, and carrying the utr-1a 3' UTR. Reference: Kratsios P, et al. Elife. 2017 Jul 5;6. pii: e25751. doi: 10.7554/eLife.25751. PMID: 28677525"|"Supplementary_genotype pha-1(e2123ts) III; otIs453 [itr-1p::gfp::utr-1a 3' utr + pha-1(+)]"
Proper citation: RRID:WB-STRAIN:WBStrain00029682 Copy
http://www.wormbase.org/db/get?name=WBStrain00029676
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00044072(ham-3)
Genomic Alteration: WBGene00044072(ham-3)
Availability: available
References:
Synonyms: ham-3(tm3309) III.
Alternate IDs: WB-STRAIN:OH11704, CGC_OH11704
Notes: Egl. Slow growing. Lethal/sterile at 25C. Maintain at 15-20C.|"Mutagen:UV/TMP"
Proper citation: RRID:WB-STRAIN:WBStrain00029676 Copy
http://www.wormbase.org/db/get?name=WBStrain00029677
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00044072(ham-3)
Genomic Alteration: WBGene00044072(ham-3)
Availability: available
References:
Synonyms: ham-3(n1654) III; otEx5093.
Alternate IDs: WB-STRAIN:OH11705, CGC_OH11705
Notes: otEx5093 [ham-3p::ham-3::GFP + elt-2::dsRed]. Pick GFP+/DsRed+ to maintain. DsRed expression is difficult to detect at low magnification. otEx5093 rescues n1654; GFP+ animals are essentially wild-type. n1654 homozygotes are Egl, slow growing, Lethal/sterile at 25C. Strain can be maintained at 25C to increase frequency of array transmission.|"otEx5093 [ham-3p::ham-3::GFP + elt-2::DsRed]. Strain can be maintained at 25C to increase frequency of array transmission. Pick GFP+ or DsRed+ to maintain. DsRed expression is difficult to detect at low magnification. otEx5093 rescues n1654; animals carrying the array are essentially wild-type. n1654 homozygotes without the array are Egl, slow growing, and lethal/sterile at 25C."
Proper citation: RRID:WB-STRAIN:WBStrain00029677 Copy
http://www.wormbase.org/db/get?name=WBStrain00029678
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: otIs439.
Alternate IDs: WB-STRAIN:OH11738, CGC_OH11738
Notes: otIs337 [lad-2p::GFP + pha-1(+)].|"otIs439 [lad-2p::GFP + pha-1(+)]."
Proper citation: RRID:WB-STRAIN:WBStrain00029678 Copy
http://www.wormbase.org/db/get?name=WBStrain00029674
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00009834(lsy-27)
Genomic Alteration: WBGene00009834(lsy-27)
Availability: available
References:
Synonyms: lsy-27(ot108) II; ntIs1 V.
Alternate IDs: WB-STRAIN:OH11630, CGC_OH11630
Notes: Made_by: E Flowers/ F Zhang|"ntIs1 [gcy-5p::GFP + lin-15(+)] V. 2 ASER."
Proper citation: RRID:WB-STRAIN:WBStrain00029674 Copy
http://www.wormbase.org/db/get?name=WBStrain00029675
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: otIs437 V.
Alternate IDs: WB-STRAIN:OH11674, CGC_OH11674
Notes: Mutagen:Gamma rays|"otIs437 [unc-3p::rab-3::GFP + ttx-3p::mCherry] V. Reporter contains 558bp upstream of unc-3 start site; marks presynapses of DA/DB class motor neurons innervating muscle and VD motor neurons in dorsal nerve cord. Reference: Kratsios P, et al. Curr Biol. 2015 May 18;25(10):1282-95."
Proper citation: RRID:WB-STRAIN:WBStrain00029675 Copy
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