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https://catalog.bcrc.firdi.org.tw/
Systematic and service oriented BioResource Center in Asia. Member of World Federation for Culture Collections from 1984 until now. BCRC is the first BRC certified by international organization of ISO quality system. Approved by Taiwan Biodiversity Information Facility.
Proper citation: Taiwan Bioresource Collection and Research Center (RRID:SCR_023180) Copy
https://github.com/mourisl/Rascaf
Software tool for scaffolding with RNA-seq read alignments. Used for improving genome assembly with RNA sequencing data.
Proper citation: Rascaf (RRID:SCR_022014) Copy
https://finngen.gitbook.io/documentation/
Public private partnership combining genotype data from Finnish biobanks and digital health record data from Finnish health registries. Provides opportunity to study genetic variation in relation to disease trajectories in isolated population.
Proper citation: FinnGen (RRID:SCR_022254) Copy
Cell Bank provides high quality resources and services including cell lines/tissues/DNA samples; cell culture training/trouble-shooting; cell culture/genetic research equipment; cell line karyotype analysis; STR/mycoplasma contamination detection; chromosome painting; cell line preservation.Cell Bank is branch of National Platform of Experimental Cell Resources for Science and Technology, Wildlife Resource Bank of the Chinese Academy of Sciences, the China Germplasm Bank of Wild Species, and also affiliated with Institute’s State Key Laboratory of Genetic Resources and Evolution.
Proper citation: Kunming Wild Animal Cell Bank (RRID:SCR_023188) Copy
https://cellbank.nibiohn.go.jp/english/
Collection of various human and animal culture cells including cancer and genetically modified cells. Cell resources are distributed to researchers across Japan and around the world. These cells are comprehensively qualified by testing microbial contamination, virus contamination and cross culture contamination. Some cells are characterized by karyotyping and/or cell surface markers. In collaboration with other major cell banks in the world, we are developing methods for cell culturing and quality control in order to support fundamental research on medical of pharmaceutical sciences.
Proper citation: Japanese Collection of Research Bioresources Cell Bank (RRID:SCR_023187) Copy
https://www.fdilab.org/toolsservices
Integrated data set and analytics platform combining Research Resource Identifiers (RRIDs), text mining and data aggregation.
Proper citation: Resource Information Network (RRID:SCR_023186) Copy
Online behavioral experiment platform.
Proper citation: Meadows (RRID:SCR_023218) Copy
Platform to manage and curate large scientific datasets. Used for scientific data management and analysis.Provides advanced functionality to organize files and complex metadata describing datasets and allows users to interact, search, and analyze these data through web application or programmatically using Python client. Provides end-to-end solution for publishing datasets through Blackfynn Discover, assigning DOIs and ensuring that published data becomes available to larger academic community in sustainable and FAIR manner.
Proper citation: Pennsieve Data Management Platform (RRID:SCR_021677) Copy
Collection of foundational software libraries, upon which ImageJ2 and Fiji are built. It is a collaboration of projects providing software for scientific computing in effort to cooperate and reuse code.
Proper citation: scijava (RRID:SCR_023335) Copy
Open browser to inform therapeutics development for tracking SARS-CoV-2 single nucleotide variations, lineages, and clades using virus genomes on GISAID database while filtering by location, date, gene, and mutation of interest. can Provides information on which virus mutations are present in area during specific period by processing data on mutations found in viral genetic material collected worldwide from hundreds of thousands of people with COVID-19, which are hosted in existing online database.
Proper citation: COVID CG (RRID:SCR_022266) Copy
https://sciendo.com/article/10.5617/jeb.2985
A software to display, record and data processing of physiological signals. DataLyser is custom-built software developed at Walter Reed Army Institute of Research, Silver Spring, MD. It is not copyrighted.
Proper citation: DataLyser (RRID:SCR_022783) Copy
https://github.com/wtsi-hpag/PretextMap
Software tool to convert SAM formatted read pairs into genome contact maps. Prepares alignments for visualization with PretextView.
Proper citation: PretextMap (RRID:SCR_022023) Copy
Project aims to change anatomy atlas by building atlases through open data, community based collaborative development, and free distribution of medical knowledge. Provides access to several 2D and 3D browser based tools.
Proper citation: Open Anatomy Project (RRID:SCR_022141) Copy
https://gitlab.com/PlantGenomicsLab/gFACs
Software package provides comprehensive framework for evaluating, filtering, and analyzing gene models from range of input applications and preparing these annotations for formal publication or downstream analysis.
Proper citation: gFACs (RRID:SCR_022017) Copy
Flagship initiative of Childrens Mercy Research Institute and Genomic Medicine Center in Kansas City. This research program is building pediatric data repository to facilitate search for answers and novel treatments.Goal is to collect genomic data and health information for 30,000 children and their families to create a database of genomes.
Proper citation: Genomic Answers for Kids (RRID:SCR_021840) Copy
https://kimlab.io/brain-map/atlas/
Labels provide resource to isolate and identify mouse brain anatomical structures. Cell type specific transgenic mice and an MRI atlas were used to adjust and further segment the labels. Highly segmented anatomical labels in the adult mouse brain common coordinate framework.
Proper citation: Enhanced and Unified Anatomical Labeling for Common Mouse Brain Atlas (RRID:SCR_022816) Copy
https://labsyspharm.github.io/dubportal
Provides integration and analysis of publicly available resources as well as newly collected transcriptomic data following deubiquitinating enzyme (DUB) knockout or inhibition to facilitate exploration of DUB function in oncology.
Proper citation: DUB Portal (RRID:SCR_022476) Copy
https://www.wikidata.org/wiki/Wikidata:WikiProject_Zika_Corpus
Web portal related to Zika virus, including metadata collection for academic publications on the topic, structured data ontology of terms, and integrated resources in the Wikidata platform.
Proper citation: WikiProject Zika Corpus (RRID:SCR_022079) Copy
https://www.syngene.com/software/genetools-automatic-image-analysis/
Software package includes comprehensive tools to provide full range of analysis for applications including chemiluminescence, chemifluorescence, fluorescence, colorimetric imaging and colony counting.
Proper citation: GeneTools (RRID:SCR_022505) Copy
https://drive.google.com/drive/folders/1K5oiXPcZDPT40irrZ_G2hZ86uNGA7CYZ?usp=sharing
Reference atlas for mice. Contains both average and annotation templates.
Proper citation: fMOST Atlas (RRID:SCR_022868) Copy
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