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Cellosaurus is database indexing available cell lines from various collections: American Type Culture Collection (ATCC), Bioresource Collection and Research Center, Taiwan (BCRC), Banco de Células do Rio de Janeiro (BCRJ), CellBank Australia (CBA), Collection of Cell Lines in Veterinary Medicine (CCLV), Cell Lines Service (CLS), Coriell, Drosophila Genomics Resource Center (DGRC), Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSMZ), European Bank for induced pluripotent Stem Cells (EBiSC), European Collection of Authenticated Cell Cultures (ECACC), Interlab Cell Line Collection (ICLC), Institute for Fermentation Osaka (IFO), Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna (IZSLER) biobank, Japanese Collection of Research Bioresources (JCRB) Cell Bank, Kunming Cell Bank of Type Culture Collection (KCB), Korean Cell Line Bank (KCLB), Millipore, National Cell Bank of Iran (NCBI_Iran), National Cancer Institute - Developmental Therapeutics Program (NCI-DTP), NINDS Human Cell and Data Repository (NHCDR), NIH AIDS Reagent Program (NIH-ARP), NISES, RIKEN Bioresource Center Cell Bank (RCB), Royan Stem Cell Bank (RSCB), Tick Cell Biobank (TCB), Tohoku University cell line catalog (TKG), and Ximbio.
https://web.expasy.org/cellosaurus/CVCL_5078
Organism: Homo sapiens (Human)
Disease: Rectal adenocarcinoma
Category: Cancer cell line
Comments: Population: Korean., Part of: Seoul National University (SNU) cell line collection., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: RRID:CVCL_5078 Copy
https://web.expasy.org/cellosaurus/CVCL_1708
Organism: Homo sapiens (Human)
Disease: Colon adenocarcinoma
Category: Cancer cell line
Comments: Population: Korean., Part of: Seoul National University (SNU) cell line collection., Part of: MD Anderson Cell Lines Project., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: RRID:CVCL_1708 Copy
https://web.expasy.org/cellosaurus/CVCL_5100
Organism: Homo sapiens (Human)
Disease: Malignant ovarian Brenner tumor
Category: Cancer cell line
Comments: Population: Korean., Part of: Seoul National University (SNU) cell line collection., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: RRID:CVCL_5100 Copy
https://web.expasy.org/cellosaurus/CVCL_5112
Organism: Homo sapiens (Human)
Disease: Cecum adenocarcinoma
Category: Cancer cell line
Comments: Characteristics: Established from a nude mouse xenograft., Population: Korean., Part of: Seoul National University (SNU) cell line collection., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: RRID:CVCL_5112 Copy
https://web.expasy.org/cellosaurus/CVCL_5105
Organism: Homo sapiens (Human)
Disease: Laryngeal squamous cell carcinoma
Category: Cancer cell line
Comments: Population: Korean., Part of: Seoul National University (SNU) cell line collection., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: RRID:CVCL_5105 Copy
https://web.expasy.org/cellosaurus/CVCL_5102
Organism: Homo sapiens (Human)
Disease: Adult hepatocellular carcinoma
Category: Cancer cell line
Comments: Population: Korean., Part of: Seoul National University (SNU) cell line collection., Part of: Liver Cancer Model Repository (LIMORE)., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: RRID:CVCL_5102 Copy
https://web.expasy.org/cellosaurus/CVCL_5080
Organism: Homo sapiens (Human)
Disease: Glioblastoma
Category: Cancer cell line
Comments: Population: Korean., Part of: TCGA-110-CL cell line panel., Part of: Seoul National University (SNU) cell line collection., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: RRID:CVCL_5080 Copy
https://web.expasy.org/cellosaurus/CVCL_4900
Organism: Homo sapiens (Human)
Disease: Lung squamous cell carcinoma
Category: Cancer cell line
Comments: Population: Japanese., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: RRID:CVCL_4900 Copy
https://web.expasy.org/cellosaurus/CVCL_2182
Organism: Homo sapiens (Human)
Disease: Pleural sarcomatoid mesothelioma
Category: Cancer cell line
Comments: Caution: Not directly described in the original publication, but indirectly mentioned ('Three others cell lines progressed in tissue culture') (PubMed=15372243)., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE)., Problematic cell line: May be misclassified. While still annotated as a pleural sarcomatoid mesothelioma cell line, a variety of omics methods are classifying this cell line as a fibroblast (DOI=10.1101/166199; DepMap=ACH-000531)..
Proper citation: DSMZ Cat# ACC-604, RRID:CVCL_2182 Copy
https://web.expasy.org/cellosaurus/CVCL_2182
Organism: Homo sapiens (Human)
Disease: Pleural sarcomatoid mesothelioma
Category: Cancer cell line
Comments: Caution: Not directly described in the original publication, but indirectly mentioned ('Three others cell lines progressed in tissue culture') (PubMed=15372243)., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE)., Problematic cell line: May be misclassified. While still annotated as a pleural sarcomatoid mesothelioma cell line, a variety of omics methods are classifying this cell line as a fibroblast (DOI=10.1101/166199; DepMap=ACH-000531)..
Proper citation: RRID:CVCL_2182 Copy
https://web.expasy.org/cellosaurus/CVCL_1670
Organism: Homo sapiens (Human)
Disease: Bladder carcinoma
Category: Cancer cell line
Comments: Population: Caucasian., Part of: UBC-40 urothelial bladder cancer cell line index., Part of: TCGA-110-CL cell line panel., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: RRID:CVCL_1670 Copy
Discontinued
https://web.expasy.org/cellosaurus/CVCL_0036
Organism: Homo sapiens (Human)
Disease: Bladder carcinoma
Category: Cancer cell line
Comments: Population: Caucasian., Part of: UBC-40 urothelial bladder cancer cell line index., Part of: TCGA-110-CL cell line panel., Part of: Naval Biosciences Laboratory (NBL) collection (transferred to ATCC in 1982)., Part of: Human Protein Atlas, Cell Atlas panel., Part of: ERK genetic alteration cell panel (ATCC TCP-1033)., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE)., Part of: BLA-40 bladder carcinoma cell line panel.
Proper citation: RRID:CVCL_0036 Copy
https://web.expasy.org/cellosaurus/CVCL_1672
Organism: Homo sapiens (Human)
Disease: Melanoma
Category: Cancer cell line
Comments: Population: Caucasian., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: RRID:CVCL_1672 Copy
Possibly Misidentified/Contaminated
https://web.expasy.org/cellosaurus/CVCL_V613
Organism: Homo sapiens (Human)
Disease: Glioblastoma
Category: Cancer cell line
Comments: Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE)., Problematic cell line: Probably misidentified/contaminated. Except of a loss of an allele of TH01 the STR profile of SF172 is identical to that of SF763. Furthermore we could not find in the literature any trace of the exact origin of SF172. According to the UCSF Biorepository, there is no record of SF172 in their system while SF763 is registered there (personal communication of Shai, Anny). The TP53 mutation recorded for SF763 is also identical to the one in SF172..
Proper citation: RRID:CVCL_V613 Copy
Contaminated
https://web.expasy.org/cellosaurus/CVCL_6950
Organism: Homo sapiens (Human)
Disease: Human papillomavirus-related cervical squamous cell carcinoma
Category: Cancer cell line
Comments: Miscellaneous: Formerly the CCRID database had an entry describing this cell line (3111C0001CCC000051). It was one of the sources for the STR profile of this entry., Population: Caucasian., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE)., Problematic cell line: Contaminated. Shown to be a ME-180 derivative (PubMed=22570425)..
Proper citation: RRID:CVCL_6950 Copy
https://web.expasy.org/cellosaurus/CVCL_1690
Organism: Homo sapiens (Human)
Disease: Glioblastoma
Category: Cancer cell line
Comments: Population: Caucasian., Part of: NCI-60 cancer cell line panel., Part of: MD Anderson Cell Lines Project., Part of: JFCR39 cancer cell line panel., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: RRID:CVCL_1690 Copy
https://web.expasy.org/cellosaurus/CVCL_2187
Organism: Homo sapiens (Human)
Disease: Adult acute megakaryoblastic leukemia
Category: Cancer cell line
Comments: Population: Japanese., Part of: LL-100 blood cancer cell line panel., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: RRID:CVCL_2187 Copy
https://web.expasy.org/cellosaurus/CVCL_K085
Organism: Homo sapiens (Human)
Disease:
Category: Finite cell line
Comments: Donor information: Established from a nonexposed individual with stomach cancer., Population: Japanese., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE)., Part of: Ban's atomic bomb survivor-derived skin fibroblast library.
Proper citation: RRID:CVCL_K085 Copy
Partially Contaminated
https://web.expasy.org/cellosaurus/CVCL_0019
Organism: Homo sapiens (Human)
Disease: Neuroblastoma
Category: Cancer cell line
Comments: Virology: Low susceptibility to infection by Zika virus (ZIKV) (PubMed=29468137)., Characteristics: Particularly suitable for research in neurodegenerative diseases due to the fact that it has a specific uptake of norepinephrine (NA), expresses bona fide neurofilament proteins, and shows activity of enzymes involved in catecholaminergic systems (tyrosine and dopamine-beta-hydroxylases) (PubMed=35893584)., Characteristics: There seem to be differences in the retinoic acid (RA)-induced neuronal phenotype of SH-SY5Y cells from ATCC and ECACC. After 5 days of RA treatment, ECACC cells are slightly larger in size and contains significant amount of neuroblastic (N-type) cells and a small fraction of epithelial (S-type) cells (PubMed=18957096)., Characteristics: Neuroblastic type (N-type) (PubMed=15720811)., Population: Caucasian., From: Memorial Sloan Kettering Cancer Center; New York; USA., Part of: Human Protein Atlas, Cell Atlas panel., Part of: ENCODE project common cell types; tier 3., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE)., Problematic cell line: Partially contaminated. Some laboratories that are redistributing this cell line are in fact redistributing a contaminated cell line of mouse origin (PubMed=25182563)..
Proper citation: RRID:CVCL_0019 Copy
https://web.expasy.org/cellosaurus/CVCL_5167
Organism: Homo sapiens (Human)
Disease: Gastric mucinous adenocarcinoma
Category: Cancer cell line
Comments: Characteristics: Established from a nude mouse xenograft., Population: Japanese., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: RRID:CVCL_5167 Copy
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