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URL: http://mullinslab.microbiol.washington.edu/publications/iyer_2012/
Proper Citation: CorQ (RRID:SCR_000660)
Description: A set of perl programs that correct errors in 454 pyrosequences by identifying and flagging poor quality insertions, deletions and substitutions within an alignment. The algorithm utilizes the inherent base quality in sequence-specific context to correct for homopolymer and non-homopolymer insertion and deletion errors. CorQ also takes uneven read mapping into account for correcting pyrosequencing miscall errors and it identifies and corrects carry forward errors.
Resource Type: software resource
Defining Citation: PMID:24039850
Keywords: homopolymer, indel, corq, uneven read mapping, pyrosequence error, forward errors
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