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URL: https://www.sanger.ac.uk/science/tools/reapr
Proper Citation: Recognition of Errors in Assemblies using Paired Reads (RRID:SCR_017625)
Description: Software tool to identify errors in genome assemblies without need for reference sequence. Can be used in any stage of assembly pipeline to automatically break incorrect scaffolds and flag other errors in assembly for manual inspection. Reports mis-assemblies and other warnings, and produces new broken assembly based on error calls.
Abbreviations: REAPR
Resource Type: data processing software, software application, software resource
Defining Citation: PMID:23710727
Keywords: Identify, error, genome, assembly, without, reference, sequence, incorrect, scaffold, error
Funding: European Union ; JSPS KAKENHI ; Wellcome Trust
Availability: Free, Available for download, Freely available
Resource Name: Recognition of Errors in Assemblies using Paired Reads
Resource ID: SCR_017625
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
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