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URL: https://combine-lab.github.io/salmon/
Proper Citation: Salmon (RRID:SCR_017036)
Description: Software tool for quantifying expression of transcripts using RNA-seq data. Provides fast and bias-aware quantification of transcript expression. Transcriptome-wide quantifier to correct for fragment GC-content bias.
Resource Type: data analysis software, data processing software, software application, software resource
Defining Citation: PMID:28263959
Keywords: quantifying, expression, transcript, RNAseq, data, correct, fragment, GC, content, bias
Funding: Alfred P. Sloan Research ; Gordon and Betty Moore Foundation Data-Driven Discovery Initiative ; NCI T32 CA009337; NHGRI R01 HG005220; NHGRI R01 HG007104; NHGRI R21 HG006913; NSF BIO-1564917; NSF CCF-1053918; NSF CCF-1256087; NSF EF-0849899
Availability: Free, Available for download, Freely available
Resource Name: Salmon
Resource ID: SCR_017036
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University of North Carolina at Chapel Hill; North Carolina; USA |
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
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