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URL: https://omictools.com/rnacompete-tool
Proper Citation: RNAcompete (RRID:SCR_015900)
Description: Method for the systematic analysis of RNA binding specificities that uses a single binding reaction to determine the relative preferences of RBPs for short RNAs that contain a complete range of k-mers in structured and unstructured RNA contexts. RNAcompete identifies expected and previously unknown RNA binding preferences., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.
Synonyms: RNAcompete Tool
Resource Type: data analysis software, data processing software, software application, software resource
Defining Citation: PMID:19561594, PMID:27956239
Keywords: rna, protein, interaction, binding, preference, rna-seq, recognition, rbp, k-mer, structured rna, unstructured rna, matlab
Funding: Canadian Foundation of Innovation ; CIHR MOP-14609; CIHR MOP-49451; CIHR MOP-93671; National Science and Engineering Research Council of Canada (NSERC) ; Natural Sciences and Engineering Research Council ; Ontario Genomics Institute ; Ontario Research Fund
Availability: THIS RESOURCE IS NO LONGER IN SERVICE
Resource Name: RNAcompete
Resource ID: SCR_015900
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
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