Searching the RRID Resource Information Network

Our searching services are busy right now. Please try again later

  • Register
X
Forgot Password

If you have forgotten your password you can enter your email here and get a temporary password sent to your email.

X

Leaving Community

Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.

No
Yes
Resource Name
RRID:SCR_013786 RRID Copied      
PDF Report How to cite
Pathway Tools (RRID:SCR_013786)
Copy Citation Copied
Resource Information

URL: http://bioinformatics.ai.sri.com/ptools/

Proper Citation: Pathway Tools (RRID:SCR_013786)

Description: A software application which supplies software tools to develop and maintain pathway/genome databases (PGDBs). These include the development of organism-specific databases, metabolic reconstruction and metabolic-flux modeling, scientific visualization and web publishing of organism-specific databases, analysis of gene-expression and metabolomics datasets, comparative genome and pathway analyses, and analysis of biological networks.

Synonyms: Pathway Tools Bioinformatics Software, Pathway Tools Software

Resource Type: data management software, software application, software resource, software toolkit

Defining Citation: DOI:10.1093/bib/bbp043

Keywords: software application, bioinformatics, software, software system, pathway genome database, PGDB, bio.tools

Funding: NIGMS GM077678; NIGMS GM080746; NIGMS GM75742

Resource Name: Pathway Tools

Resource ID: SCR_013786

Expand All
This resource

is used by

BioCyc

is used by

EcoCyc

is used by

MetaCyc

is listed by

BioCyc

is listed by

bio.tools

is listed by

Debian

is related to

BioCyc

is related to

MetaCyc

is related to

EcoCyc

is related to

HumanCyc: Encyclopedia of Homo sapiens Genes and Metabolism

is related to

BioCyc

Usage and Citation Metrics

We found {{ ctrl2.mentions.all_count }} mentions in open access literature.

We have not found any literature mentions for this resource.

We are searching literature mentions for this resource.

Most recent articles:

{{ mention._source.dc.creators[0].familyName }} {{ mention._source.dc.creators[0].initials }}, et al. ({{ mention._source.dc.publicationYear }}) {{ mention._source.dc.title }} {{ mention._source.dc.publishers[0].name }}, {{ mention._source.dc.publishers[0].volume }}({{ mention._source.dc.publishers[0].issue }}), {{ mention._source.dc.publishers[0].pagination }}. (PMID:{{ mention._id.replace('PMID:', '') }})

Checkfor resource mentions.

Collaborator Network

A list of researchers who have used the resource and an author search tool

Find mentions based on location


{{ ctrl2.mentions.errors.location }}

A list of researchers who have used the resource and an author search tool. This is available for resources that have literature mentions.

Ratings and Alerts

No rating or validation information has been found for Pathway Tools.

No alerts have been found for Pathway Tools.

Data and Source Information

Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400