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URL: http://yetfasco.ccbr.utoronto.ca/
Proper Citation: YeTFaSCo (RRID:SCR_006893)
Description: Collection of all available transcription factor (TF) specificities for the yeast Saccharomyces cerevisiae in Position Frequency Matrix (PFM) or Position Weight Matrix (PWM) formats. The specificities are evaluated for quality using several metrics. With this website, you can scan sequences with the motifs to find where potential binding sites lie, inspect precomputed genome-wide binding sites, find which TFs have similar motifs to one you have found, and download the collection of motifs. Submissions are welcome.
Abbreviations: YeTFaSCo
Synonyms: Yeast Transcription Factor Specificity Compendium, YeTFaSCo: The Yeast Transcription Factor Specificity Compendium
Resource Type: analysis service resource, data analysis service, data or information resource, data repository, database, production service resource, service resource, storage service resource
Defining Citation: PMID:22102575
Keywords: transcription factor, binding site, sequence, yeast, motif, gene, genome, protein, protein complex
Funding: Ontario Graduate Scholarship awards ; Canadian Institutes of Health Research Operating Grant MOP-490425; Canadian Institutes of Health Research Operating Grant MOP-86705
Availability: Acknowledgement requested
Resource Name: YeTFaSCo
Resource ID: SCR_006893
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
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