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URL: http://www.bioconductor.org/packages/devel/bioc/html/GeneNetworkBuilder.html
Proper Citation: GeneNetworkBuilder (RRID:SCR_006455)
Description: Software application for discovering direct or indirect targets of transcription factors (TFs) using ChIP-chip or ChIP-seq, and microarray or RNA-seq gene expression data. Inputting a list of genes of potential targets of one TF from ChIP-chip or ChIP-seq, and the gene expression results, it generates a regulatory network of the TF.
Abbreviations: GeneNetworkBuilder
Synonyms: GeneNetworkBuilder - Build Regulatory Network from ChIP-chip/ChIP-seq and Expression Data
Resource Type: software application, software resource
Keywords: transcription factor, graph, network, microarray, sequencing, chip-chip, chip-seq, gene expression, regulatory network, target
Availability: GNU General Public License, v2 or greater
Resource Name: GeneNetworkBuilder
Resource ID: SCR_006455
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
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