URL: http://amp.pharm.mssm.edu/lib/chea.jsp
Proper Citation: ChEA (RRID:SCR_005403)
Description: Data analysis service for gene-list enrichment analysis against a manual database. It allows users to input lists of mammalian gene symbols for which the program computes over-representation of transcription factor targets from the ChIP-X database. The database integrates interaction data from ChIP-chip, ChIP-seq, ChIP-PET and DamID studies and contains 189,933 interactions, manually extracted from 87 publications, describing the binding of 92 transcription factors to 31,932 target genes.
Abbreviations: ChEA
Synonyms: ChIP Enrichment Analysis
Resource Type: service resource, software application, data analysis service, data or information resource, software resource, database, production service resource, analysis service resource
Defining Citation: PMID:20709693
Keywords: chip, transcription factor, interaction, mrna expression, gene, target gene, command-line, chip-chip, chip-seq
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