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PeptideAtlas provides a multi-organism, publicly accessible compendium of peptides identified in a large set of tandem mass spectrometry proteomics experiments collected for human, mouse, yeast, and several other organisms.

(last updated: Nov 28, 2017)

Data or Model Molecule

1,540 Results - per page

AccessionSample TitleSummaryOrganismCharacteristicsInstrumentTreatmentGrowthDigestionExtractSeparationReference
PAe002080MIT015MIT015 heavy mitochondriaQSTAR XL
PAe000152YeastICATYeastICAT ICAT labeled YeastLCQ Classic
PAe003760Hs_HEK293_SILACHs_HEK293_SILACLTQ Orbitrap VelosPMID:21586754
PAe003955Hs_K562_SCX-Ti-IMAC-HILIC_3D_HCDHs_K562_SCX-Ti-IMAC-HILIC_3D_HCD SCX for Peptide Fractionation Phosphopeptide Enrichment HILIC for the Enriched Phosphopeptides Fractionation
PAe003958Hs_K562_Ti-IMAC_1D_HCDHs_K562_Ti-IMAC_1D_HCD Phosphopeptide Enrichment
PAe002001MAC-T_2MAC-T_2 MAC-T mammary epithelial cell lysate with sodium butarate stiumulation (72 hr). The cells were lysed in RIPA buffer.QSTAR XL
PAe000481Pig_Liver_CMC038_XL1biosource.anatomical.site.ontology.entry: EV:0100089 liver developmental.stage.ontology.entry: pathology.ontology.entry: Confidential. Collaboration agreement prohibits any experimental description.
PAe002016Colostrum7Colostrum7 ColostrumQSTAR Elite
PAe000308Mouse Liver Organelle 20_9-10Mouse Liver Organelle 20_9-10 Shotgun sequencing of Organelle-enriched mouse liver samples, fractions 20_9-10LCQ DECA XP
PAe000759Landrace_Four_Months_Liver_HEP.SKL012_XL1biosource.anatomical.site.ontology.entry: EV:0100089 liver developmental.stage.ontology.entry: EV:0300042 four months pathology.ontology.entry: EV:0400162 Relate liver metabolism with meat quality in two different pig breeds (Duroc and Landrace). Meat quality assesed on a scale from 1 (best) to 100 (worst).
PAe004801TCGA Cancer Proteome Study of Breast Tissue, Phospho Enrichment, iTRAQ, AR-A0TT-01A_AR-A1AQ-01A_AO-A12B-01ATCGA Cancer Proteome Study of Breast Tissue, Phospho Enrichment, iTRAQ, AR-A0TT-01A_AR-A1AQ-01A_AO-A12B-01A Sample description: https://cptac-data-portal.georgetown.edu/cptac/documents/CPTAC_TCGA_BreastCancer_select_clinical_data_r1.xlsx iTRAQ sample mapping: https://cptac-data-portal.georgetown.edu/cptac/documents/CPTAC_TCGA_Breast_Cancer_iTRAQ_Sample_Mapping.xlsx
PAe000442Pig_Lung_CMC039_XL1biosource.anatomical.site.ontology.entry: EV:0100042 lung developmental.stage.ontology.entry: pathology.ontology.entry: Confidential. Collaboration agreement prohibits any experimental description.
PAe000625Pig_testicle_TES002biosource.anatomical.site.ontology.entry: EV:0100102 developmental.stage.ontology.entry: EV:0300050 pathology.ontology.entry: EV:0400162 Characterization of testicle proteome
PAe002026Mammary gland_1Mammary gland_1 Homogenate of udder duct tissueQSTAR XL
PAe002040Milk_12Milk_12 MilkQSTAR Elite
PAe000605Pig_Longisimus_Dorsi_CMC006CMC006_Elite
PAe000829HS1_0505_NeutrophilHS1_0505_NeutrophilLTQ
PAe002043MIT017MIT017 heavy mitochondriaQSTAR XL
PAe001440Martaantenna_BLK15Martaantenna_BLK15LTQ Orbitrap XL
PAe000583Pig_liver_CMC028_XL1CMC028_XL1
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