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HomoloGene
Automated system for constructing putative homology groups from complete gene sets of wide range of eukaryotic species. Databse that provides system for automatic detection of homologs, including paralogs and orthologs, among annotated genes of sequenced eukaryotic genomes. HomoloGene processing uses proteins from input organisms to compare and sequence homologs, mapping back to corresponding DNA sequences. Reports include homology and phenotype information drawn from Online Mendelian Inheritance in Man, Mouse Genome Informatics, Zebrafish Information Network, Saccharomyces Genome Database and FlyBase.
Details
- Resource Type: Resource, service resource, data or information resource, database
- Keywords: homolog, paralog, ortholog, genome, gene, protein, protein alignment, phenotype, conserved domain, homology, amino acid sequence, cell, dna, gold standard
- Resource ID: SCR_002924
- Proper Citation: (HomoloGene, RRID:SCR_002924)
- Parent Organization: NCBI
- Related Condition:
- Funding Agency:
- Relation: related to: OMIM, Mouse Genome Informatics (MGI), Zebrafish Information Network (ZFIN), SGD, FlyBase, ProbeMatchDB 2.0, Biomine, Consensus CDS, used by: NIF Data Federation, Nowomics, MitoMiner, listed by: OMICtools, re3data.org
- Reference: PMID:23193264
- Website Status: Last checked up
- Alternate IDs: nif-0000-02975, OMICS_01544
- Alternate URLs: http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=homologene
- Old URLs:
- v_uuid: 741ca0b8-a045-5bcf-88af-c2463b2007a8
