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Arid1a restrains Kras-dependent changes in acinar cell identity.

eLife | 2018

Mutations in members of the SWI/SNF chromatin remodeling family are common events in cancer, but the mechanisms whereby disruption of SWI/SNF components alters tumorigenesis remain poorly understood. To model the effect of loss of function mutations in the SWI/SNF subunit Arid1a in pancreatic ductal adenocarcinoma (PDAC) initiation, we directed shRNA triggered, inducible and reversible suppression of Arid1a to the mouse pancreas in the setting of oncogenic KrasG12D. Arid1a cooperates with Kras in the adult pancreas as postnatal silencing of Arid1a following sustained KrasG12D expression induces rapid and irreversible reprogramming of acinar cells into mucinous PDAC precursor lesions. In contrast, Arid1a silencing during embryogenesis, concurrent with KrasG12D activation, leads to retention of acinar cell fate. Together, our results demonstrate Arid1a as a critical modulator of Kras-dependent changes in acinar cell identity, and underscore an unanticipated influence of timing and genetic context on the effects of SWI/SNF complex alterations in epithelial tumorigenesis.

Pubmed ID: 30014851 RIS Download

Associated grants

  • Agency: NIH HHS, United States
    Id: U54 OD020355
  • Agency: NCI NIH HHS, United States
    Id: CA13106
  • Agency: Howard Hughes Medical Institute, United States
  • Agency: NCI NIH HHS, United States
    Id: F32 CA177072
  • Agency: NCI NIH HHS, United States
    Id: P30 CA008748
  • Agency: NCI NIH HHS, United States
    Id: 1F32CA177072-01
  • Agency: NCI NIH HHS, United States
    Id: P01 CA013106
  • Agency: NCI NIH HHS, United States
    Id: Cancer Center Core Grants P30-CA008748
  • Agency: NCI NIH HHS, United States
    Id: R01 CA195787

Publication data is provided by the National Library of Medicine ® and PubMed ®. Data is retrieved from PubMed ® on a weekly schedule. For terms and conditions see the National Library of Medicine Terms and Conditions.

This is a list of tools and resources that we have found mentioned in this publication.


BioLegend (tool)

RRID:SCR_001134

Commercial antibody supplier and developer for biomedical research. These products are compatible with use in flow cytometry and mass cytometry, immunoprecipitation and chip, western blotting, immunofluorescence microscopy, and quantitative multiplexing.

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Thermo Fisher Scientific (tool)

RRID:SCR_008452

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RRID:SCR_009181

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Picard (tool)

RRID:SCR_006525

Java toolset for working with next generation sequencing data in the BAM format.

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RRID:SCR_002677

Digital image processing system where microscope settings and processing steps may be adjusted in single user interface. Can acquire images from variety of cameras. Includes software package for capturing, archiving and preparing images for publication. Allows users to visualize and present images in several dimensions. Functionality of imaging toolbox expands constantly with wide range of different modules that are tailored to specific applications or microscope accessories. This resource is duplicated by SCR_018376

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RRID:SCR_003496

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HTSeq (tool)

RRID:SCR_005514

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on February 28,2023. Software Python package that provides infrastructure to process data from high-throughput sequencing assays. While the main purpose of HTSeq is to allow you to write your own analysis scripts, customized to your needs, there are also a couple of stand-alone scripts for common tasks that can be used without any Python knowledge.

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RRID:AB_673567

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ARID1A/BAF250A (D2A8U) Rabbit mAb #12354 (antibody)

RRID:AB_2637010

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Anti-GFP antibody (antibody)

RRID:AB_300798

This polyclonal targets GFP

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RRID:AB_2239761

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anti-tRFP (antibody)

RRID:AB_2571743

This polyclonal targets Full-length recombinant denatured and non-denatured TagRFP comprising 6XHis tag

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Purified Cytokeratin 8 mAb (antibody)

RRID:AB_2565043

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Purified Mouse Anti-E-cadherin (antibody)

RRID:AB_397580

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CD45 antibody [I3/2.3] (antibody)

RRID:AB_470499

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RRID:AB_2085841

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BAF250a (PSG3) (antibody)

RRID:AB_673396

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RRID:AB_2239761

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Purified Cytokeratin 8 mAb (antibody)

RRID:AB_2565043

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Anti-Sox9 (antibody)

RRID:AB_2239761

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RRID:AB_673567

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RRID:AB_2637010

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View all literature mentions

anti-tRFP (antibody)

RRID:AB_2571743

This polyclonal targets Full-length recombinant denatured and non-denatured TagRFP comprising 6XHis tag

View all literature mentions

Anti-GFP antibody (antibody)

RRID:AB_300798

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