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Source
GeneNetwork
Web platform that provides access to data and tools to study complex networks of genes, molecules, and higher order gene function and phenotypes. Sequence data (SNPs) and transcriptome data sets (expression genetic or eQTL data sets). Quantitative trait locus (QTL) mapping module that is built into GN is optimized for fast on-line analysis of traits that are controlled by combinations of gene variants and environmental factors. Used to study humans, mice (BXD, AXB, LXS, etc.), rats (HXB), Drosophila, and plant species (barley and Arabidopsis). Users are welcome to enter their own private data.
Details
- Resource Type: Resource, service resource, data or information resource, data repository, storage service resource, database
- Keywords: Variation, trait, vertebrate trait ontology, phenotype, systems genetics, quantitative trait, gene mapping, experimental precision medicinenetwork analysis, causal modeling, genomic location, genotype, inbred strain, sex, heterogeneous stock, phenome, phenotype, QTL, expression QTL, genetic reference population, single nucleotide polymorphism, RNA expression, protein expression, metabolite expression, metagenomics, epigenomics, gene-by-environmental interaction, epistasis, FAIR data standards, open source software
- Resource ID: SCR_002388
- Proper Citation: (GeneNetwork, RRID:SCR_002388)
- Parent Organization: University of Tennessee Health Science Center; Tennessee; USA
- Related Condition:
- Funding Agency: NCI, NCRR, NIA, NIAAA, NIDA, NIGMS
- Relation: related to: Monarch Initiative, NIH Data Sharing Repositories, used by: NIF Data Federation
- Reference: PMID:8043953, PMID:11737945, PMID:15043217, PMID:15114364, PMID:15043220, PMID:15043219, PMID:15711545, PMID:18368372, PMID:27933521
- Website Status: Last checked up
- Alternate IDs: nif-0000-00380
- Alternate URLs:
- Old URLs:
- v_uuid: b6575006-79a8-5058-9e95-6195b2587318
